Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS17370	ABZR87_RS17375	ABZR87_RS17380	ABZR87_RS17385	ABZR87_RS17390
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-1.5	-0.3	+0.1	-0.5	+0.0
micoeukaryotes	Dictyostellum sp.mixed culture-2	-0.3	-0.5	-0.5	-0.5	+0.1
micoeukaryotes	C.elegans, mixed culture-1	-0.5	-0.4	-0.6	-0.3	+0.1
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-0.4	-0.4	-0.4	-0.0	-0.4
carbon source	Azelaic (C)	-0.3	+0.0	-0.2	-0.1	-0.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.4	-0.0	-0.2	+0.1	-0.8
micoeukaryotes	C.elegans, mixed culture-2	-0.3	-0.2	-0.3	-0.4	+0.0
root	root sample 5; outgrowth in LB	-0.6	-0.0	-0.1	-0.1	-0.4
rhizosphere	rhizosphere sample 9; outgrowth in LB	-0.5	+0.1	+0.0	+0.1	-0.4
nitrogen source	nitrogen source nitrite 5mM	-0.3	+0.1	+0.3	+0.2	-0.5
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.1	+0.2	-0.6	+0.2	+0.2
soil	soil EcoFAB sample 2; outgrowth in LB	+0.7	-0.1	-0.2	+0.0	-0.3
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.2	+0.1	-0.3	+0.1	+0.5
carbon source	Octanoic (C)	-0.2	+0.2	+0.3	+0.8	-0.7
nitrogen source	nitrogen source nitrate 5mM	+0.4	+0.1	+0.1	+0.1	-0.4
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.1	+0.5	-0.1	+0.2	+1.0
carbon source	Heptanoic (C)	+0.3	+0.0	+0.1	+0.4	-0.4
nitrogen source	nitrogen source nitrate 5mM	+0.4	+0.3	+0.2	+0.1	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.4	+0.1	-0.1	+0.3	+0.7
carbon source	Valeric (C)	+0.4	-0.1	-0.2	+0.1	+0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.4	+0.3	-0.4	+0.5	-0.0
phage	Ra1_0.01	+0.3	+0.4	+0.2	+0.3	-0.1
carbon source	Pimelic (C)	+0.3	+0.3	+0.1	+0.1	+0.4
nitrogen source	nitrogen source nitrite 1mM	+0.4	+0.3	+0.4	+0.1	+0.1
carbon source	Octanoic (C)	+0.1	+0.4	+0.3	+0.3	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.0	-0.0	+0.0	-0.1	+0.7
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+1.3	+0.1	-0.1	+0.4	+0.4
phage	Ra3_0.1	+0.5	+0.6	+0.6	+0.4	+0.2
phage	Ra1_0.1	+0.7	+0.8	+0.7	+0.8	+0.1
phage	Ra3_1	+1.2	+1.0	+1.1	+0.9	+0.1