Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS16840	ABZR87_RS16845	ABZR87_RS16850	ABZR87_RS16855	ABZR87_RS16860
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	-0.1	-4.6	+0.1	-0.0	-0.2
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.0	-2.7	+0.0	+1.1	-1.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	-0.4	+0.4	-0.8	-2.7
carbon source	Octanoic (C)	+0.2	-4.2	-0.1	+0.2	+0.6
soil	soil sample 3; outgrowth in LB	-0.0	-4.1	-0.1	+0.2	+0.9
root	root sample 6; outgrowth in LB	+0.3	-0.8	+0.0	-1.3	-1.5
rhizosphere	rhizosphere sample 1; outgrowth in LB	+0.1	-3.1	+0.3	+0.7	-1.2
root	root sample 4; outgrowth in LB	-0.3	-0.4	-0.0	+0.4	-2.4
carbon source	Sebacic (C)	+0.0	-4.1	+0.3	+0.3	+0.9
nitrogen source	nitrogen source nitrite 0.5mM	+0.3	-0.8	-0.3	-0.3	-1.0
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-0.1	-4.4	+0.3	+1.0	+1.2
carbon source	Pimelic (C)	-0.3	-1.4	-0.0	+0.3	-0.5
soil	soil sample 4; outgrowth in LB	-0.1	-1.3	+0.4	+0.8	-1.4
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-0.4	+0.4	-0.0	-1.2	-0.3
micoeukaryotes	Acanthamoeba sp., muxed culture-1	+0.0	+0.8	-0.1	-0.5	-1.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	+0.6	+0.2	-0.1	-1.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.0	-1.4	+0.8	-0.5	+0.3
nitrogen source	nitrogen source nitrate 5mM	+0.0	+0.9	-0.2	-0.5	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.0	+0.8	+0.7	-0.0	-1.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.3	+1.1	+0.4	+0.0	-0.8
soil	soil sample 9; outgrowth in LB	-0.0	+0.8	-0.0	+0.9	-1.1
carbon source	Dodecandioic (C)	+0.0	-0.8	+0.2	+1.1	+0.2
carbon source	4-Hydroxybenzoic Acid (C)	-0.4	-1.4	+0.4	+1.3	+0.8
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+0.2	+1.0	-0.2	+0.5	-0.7
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	-0.9	+0.5	+0.9	+0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	+1.1	+0.1	+0.9	-0.9
soil	soil EcoFAB sample 1; outgrowth in LB	-0.3	-0.1	+0.2	+1.4	+0.4
carbon source	Azelaic (C)	+0.3	-0.4	+0.3	+1.2	+0.7
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	+0.1	+0.3	+0.3	+1.0	+0.7
rhizosphere	rhizosphere sample 2; outgrowth in LB	+0.2	+0.4	+0.1	+1.4	+0.3