Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS16580 and ABZR87_RS16585 overlap by 17 nucleotidesABZR87_RS16585 and ABZR87_RS16590 are separated by 63 nucleotidesABZR87_RS16590 and ABZR87_RS16595 are separated by 19 nucleotidesABZR87_RS16595 and ABZR87_RS16600 are separated by 367 nucleotides ABZR87_RS16580: ABZR87_RS16580 - ABC transporter ATP-binding protein, at 68,271 to 69,125 _RS16580 ABZR87_RS16585: ABZR87_RS16585 - OsmC family protein, at 69,109 to 69,699 _RS16585 ABZR87_RS16590: ABZR87_RS16590 - ABC transporter permease, at 69,763 to 71,601 _RS16590 ABZR87_RS16595: ABZR87_RS16595 - ABC transporter substrate-binding protein, at 71,621 to 72,754 _RS16595 ABZR87_RS16600: ABZR87_RS16600 - fatty acid desaturase, at 73,122 to 74,096 _RS16600
Group Condition ABZR87_RS16580 ABZR87_RS16585 ABZR87_RS16590 ABZR87_RS16595 ABZR87_RS16600
nitrogen source nitrogen source nitrate 20mM -0.8 -0.3 -0.1 -0.1 +0.2
root root EcoFAB sample 2; outgrowth in LB -0.3 -0.7 +0.0 -0.2 +0.2
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.0 +0.1 -0.4 -0.5
rhizosphere rhizosphere sample 7; outgrowth in LB -0.8 -0.1 -0.0 -0.0 +0.0
phage Ra1_0.01 -0.8 +0.1 -0.0 -0.0 +0.1
phage Ra1_0.1 -0.6 +0.1 -0.1 +0.1 -0.0
soil soil sample 3; outgrowth in LB -0.4 -0.2 -0.0 -0.1 +0.2
root root EcoFAB sample 1; outgrowth in LB -0.8 -0.3 +0.1 +0.3 +0.2
carbon source Octanoic (C) -0.2 -0.1 +0.2 +0.0 -0.3
soil soil EcoFAB sample 1; outgrowth in LB +0.6 -1.1 +0.0 +0.1 +0.0
carbon source Sebacic (C) +0.3 -0.4 -0.0 +0.0 -0.3
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.4 -0.2 -0.0 +0.1 +0.2
carbon source Azelaic (C) -0.4 +0.1 +0.0 -0.2 +0.2
nitrogen source nitrogen source nitrate 5mM +0.3 -0.6 -0.0 -0.0 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 -0.4 +0.0 -0.4 +0.1
soil soil sample 2; outgrowth in LB -0.4 +0.2 +0.2 +0.0 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 -0.4 -0.1 -0.1 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 -0.2 -0.1 -0.1 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.3 +0.1 +0.1 +0.3
carbon source Protocatechuic Acid (C) +0.6 -0.2 -0.1 +0.1 -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.3 +0.2 -0.1 +0.4
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 +0.2 -0.0 -0.3 +0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.8 +0.2 -0.0 +0.0 -0.4
root root sample 6; outgrowth in LB +0.3 -0.4 +0.1 +0.1 +0.5
root root sample 4; outgrowth in LB +0.5 +0.0 +0.3 -0.1 -0.0
carbon source Octanoic (C) +0.5 -0.1 +0.2 -0.0 +0.1
rhizosphere rhizosphere sample 9; outgrowth in LB +0.6 -0.0 +0.1 +0.1 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.0 -0.1 +0.2 +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +0.4 +0.1 +0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.9 -0.1 -0.2 -0.1 +0.1
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ABZR87_RS16585
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