Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS16325 and ABZR87_RS16330 are separated by 130 nucleotidesABZR87_RS16330 and ABZR87_RS16335 are separated by 10 nucleotidesABZR87_RS16335 and ABZR87_RS16340 are separated by 7 nucleotidesABZR87_RS16340 and ABZR87_RS16345 overlap by 4 nucleotides ABZR87_RS16325: ABZR87_RS16325 - ABC transporter substrate-binding protein, at 15,309 to 16,469 _RS16325 ABZR87_RS16330: ABZR87_RS16330 - branched-chain amino acid ABC transporter permease, at 16,600 to 17,481 _RS16330 ABZR87_RS16335: ABZR87_RS16335 - branched-chain amino acid ABC transporter permease, at 17,492 to 18,400 _RS16335 ABZR87_RS16340: ABZR87_RS16340 - ABC transporter ATP-binding protein, at 18,408 to 19,205 _RS16340 ABZR87_RS16345: ABZR87_RS16345 - ABC transporter ATP-binding protein, at 19,202 to 19,927 _RS16345
Group Condition ABZR87_RS16325 ABZR87_RS16330 ABZR87_RS16335 ABZR87_RS16340 ABZR87_RS16345
carbon source Octanoic (C) -0.0 -0.3 +0.2 -4.2 -0.0
carbon source 4-Hydroxybenzoic Acid (C) -0.6 -0.6 -0.3 -2.0 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.6 -0.5 -1.0 -0.3
carbon source D-Glucose (C) -0.3 -0.4 -0.5 -0.9 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.1 -0.4 -2.1 +0.1
root root sample 6; outgrowth in LB -0.5 -0.5 -0.2 -0.5 -0.6
carbon source Suberic (C) -0.2 -1.0 -0.3 -0.4 -0.2
carbon source Valeric (C) -0.2 -0.8 -0.0 -0.4 -0.4
carbon source Valeric (C) -0.1 -0.6 -0.4 -0.6 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -0.1 -0.6 -1.1 +0.4
rhizosphere rhizosphere sample 8; outgrowth in LB +0.1 -0.2 -0.1 -1.6 +0.1
carbon source Sebacic (C) -0.2 -0.5 -0.5 -0.0 -0.5
carbon source Heptanoic (C) -0.1 -0.2 -0.3 -0.5 -0.4
carbon source Sebacic (C) -0.3 -1.3 -0.4 +0.0 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.5 -0.6 -1.1 -0.3
rhizosphere rhizosphere sample 1; outgrowth in LB -0.4 -0.1 -0.1 -1.0 +0.3
root root sample 5; outgrowth in LB -0.3 -1.2 +0.4 +0.5 -0.1
nitrogen source nitrogen source nitrite 5mM -0.2 -0.2 -0.4 +0.6 -0.2
carbon source L-Glutamic (C) -0.3 -0.2 -0.5 +0.5 +0.2
carbon source Octanoic (C) +0.3 -0.6 +0.1 +0.4 -0.4
soil soil EcoFAB sample 1; outgrowth in LB +0.2 -1.4 +0.3 +0.8 +0.0
nitrogen source nitrogen source nitrite 0.5mM +0.3 -0.3 -0.6 +0.6 +0.0
root root EcoFAB sample 2; outgrowth in LB +0.6 -1.0 -0.2 +1.0 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -0.3 -0.6 +1.9 +0.3
soil soil EcoFAB sample 2; outgrowth in LB -0.1 +0.1 -0.3 +1.0 -0.0
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.1 -0.3 +0.5 +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.2 -0.2 +1.3 +0.2
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.1 +0.4 -0.2 +0.7 +0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 +0.1 +0.3 +1.5 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 +0.4 +0.0 +0.1 +1.8
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ABZR87_RS16325
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ABZR87_RS16330
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