Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS16240 and ABZR87_RS16245 are separated by 11 nucleotidesABZR87_RS16245 and ABZR87_RS16250 are separated by 4 nucleotidesABZR87_RS16250 and ABZR87_RS16255 are separated by 203 nucleotidesABZR87_RS16255 and ABZR87_RS16260 are separated by 305 nucleotides ABZR87_RS16240: ABZR87_RS16240 - DUF3306 domain-containing protein, at 3,436,933 to 3,437,502 _RS16240 ABZR87_RS16245: ABZR87_RS16245 - DUF3305 domain-containing protein, at 3,437,514 to 3,438,041 _RS16245 ABZR87_RS16250: ABZR87_RS16250 - iron-sulfur cluster carrier protein ApbC, at 3,438,046 to 3,439,134 _RS16250 ABZR87_RS16255: ABZR87_RS16255 - OmpA family protein, at 3,439,338 to 3,439,967 _RS16255 ABZR87_RS16260: ABZR87_RS16260 - methionine--tRNA ligase, at 3,440,273 to 3,442,342 _RS16260
Group Condition ABZR87_RS16240 ABZR87_RS16245 ABZR87_RS16250 ABZR87_RS16255 ABZR87_RS16260
carbon source Octanoic (C) -1.1 -0.1 -2.8 -2.9 N.D.
carbon source Sebacic (C) -0.6 -0.6 -2.5 -2.9 N.D.
carbon source Octanoic (C) +0.0 -0.0 -2.5 -4.0 N.D.
carbon source Heptanoic (C) -0.3 -0.4 -3.4 -1.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -0.6 -2.0 -1.5 N.D.
carbon source Heptanoic (C) -0.0 -0.4 -2.8 -1.0 N.D.
carbon source Sebacic (C) -0.5 -0.4 -2.8 -0.3 N.D.
carbon source Dodecandioic (C) -0.0 -0.3 -2.3 -1.4 N.D.
carbon source Lauric (C) -0.3 -0.1 -2.2 -1.0 N.D.
carbon source Dodecandioic (C) -0.1 -0.1 -2.2 -0.9 N.D.
carbon source Hexanoic (C) +0.0 -0.2 -2.2 -0.4 N.D.
carbon source propionate (C) -0.1 -0.2 -2.1 -0.5 N.D.
carbon source D-Galactose (C) -0.4 -0.5 -1.6 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.2 -1.4 -1.0 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.2 -0.3 -2.2 -0.1 N.D.
carbon source butyrate (C) -0.3 -0.5 -2.3 +0.3 N.D.
carbon source Pimelic (C) +0.1 -0.2 -2.2 -0.3 N.D.
carbon source Beta-alanine (C) -0.3 -0.4 -1.8 +0.1 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.3 +0.1 -2.3 +0.1 N.D.
nitrogen source nitrogen source nitrite 5mM +0.0 -0.0 -2.6 +0.1 N.D.
carbon source Suberic (C) +0.2 -0.3 -2.3 +0.1 N.D.
carbon source butyrate (C) -0.1 -0.2 -2.2 +0.2 N.D.
nitrogen source nitrogen source nitrite 5mM +0.0 +0.3 -2.3 +0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.4 -2.1 +0.1 N.D.
carbon source Protocatechuic Acid (C) -0.4 -0.3 -1.5 +0.9 N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.1 +0.1 -1.1 +2.2 N.D.
micoeukaryotes C.elegans, mixed culture-1 +0.2 +0.1 -0.9 +3.0 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 +0.1 +0.3 -0.5 +2.8 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.0 +0.5 -0.3 +3.3 N.D.
micoeukaryotes C.elegans, mixed culture-2 +0.3 +0.1 -0.0 +3.2 N.D.
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