Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS16070 and ABZR87_RS16075 are separated by 22 nucleotidesABZR87_RS16075 and ABZR87_RS16080 are separated by 43 nucleotidesABZR87_RS16080 and ABZR87_RS16085 are separated by 14 nucleotidesABZR87_RS16085 and ABZR87_RS16090 are separated by 9 nucleotides ABZR87_RS16070: ABZR87_RS16070 - Smr/MutS family protein, at 3,398,345 to 3,399,010 _RS16070 ABZR87_RS16075: ABZR87_RS16075 - trimeric intracellular cation channel family protein, at 3,399,033 to 3,399,656 _RS16075 ABZR87_RS16080: ABZR87_RS16080 - P-II family nitrogen regulator, at 3,399,700 to 3,400,038 _RS16080 ABZR87_RS16085: ABZR87_RS16085 - class I SAM-dependent methyltransferase, at 3,400,053 to 3,400,679 _RS16085 ABZR87_RS16090: ABZR87_RS16090 - NAD+ synthase, at 3,400,689 to 3,402,326 _RS16090
Group Condition ABZR87_RS16070 ABZR87_RS16075 ABZR87_RS16080 ABZR87_RS16085 ABZR87_RS16090
carbon source Azelaic (C) -0.1 -0.4 -6.7 -0.2 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.1 -0.4 -6.3 -0.2 N.D.
carbon source Heptanoic (C) +0.3 -0.2 -6.6 -0.1 N.D.
carbon source Pimelic (C) -0.3 -0.1 -5.2 -0.2 N.D.
carbon source Sebacic (C) -0.1 -0.2 -5.5 +0.1 N.D.
carbon source Octanoic (C) +0.3 +0.2 -6.0 -0.1 N.D.
carbon source Sebacic (C) +0.3 +0.1 -6.0 +0.0 N.D.
carbon source Octanoic (C) +0.2 -0.6 -4.6 +0.3 N.D.
carbon source propionate (C) -0.2 +0.1 -4.1 -0.3 N.D.
soil soil EcoFAB sample 2; outgrowth in LB -0.1 -0.2 -3.7 -0.2 N.D.
carbon source D-Glucose (C) -0.2 -0.3 -3.7 +0.2 N.D.
carbon source Beta-alanine (C) -1.6 -1.9 -0.5 +0.1 N.D.
carbon source Dodecandioic (C) +0.0 -0.1 -3.8 +0.1 N.D.
micoeukaryotes C.elegans, mixed culture-2 -0.1 +0.1 -3.7 +0.0 N.D.
carbon source Protocatechuic Acid (C) -0.3 -0.1 -3.2 -0.0 N.D.
carbon source Lauric (C) -0.4 -0.3 -2.8 +0.0 N.D.
carbon source Beta-alanine (C) -1.4 -2.3 +0.1 +0.2 N.D.
carbon source Heptanoic (C) -0.1 -0.2 -3.2 +0.2 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB -0.7 +0.1 -2.7 +0.2 N.D.
carbon source adipate (C) -0.1 -0.1 -2.6 -0.2 N.D.
carbon source Dodecandioic (C) -0.2 -0.0 -2.4 -0.1 N.D.
carbon source Pimelic (C) -0.0 -0.2 -2.5 +0.1 N.D.
carbon source D-Glucose (C) -0.1 +0.0 -2.2 -0.2 N.D.
soil soil sample 8; outgrowth in LB -0.7 +0.1 -1.6 -0.1 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB -0.1 +0.2 -2.3 +0.1 N.D.
rhizosphere rhizosphere sample 8; outgrowth in LB -0.6 +0.2 -2.1 +0.4 N.D.
root root EcoFAB sample 1; outgrowth in LB -0.1 +0.0 -2.1 +0.3 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.9 -0.0 -1.3 +0.4 N.D.
root root sample 4; outgrowth in LB -0.1 -0.3 -1.7 +0.7 N.D.
root root sample 5; outgrowth in LB -0.1 +0.1 +3.4 -0.7 N.D.
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