Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS15970	ABZR87_RS15975	ABZR87_RS15980	ABZR87_RS15985	ABZR87_RS15990
soil	soil sample 5; outgrowth in LB	-0.6	-0.1	-0.1	-0.8	-1.9
rhizosphere	rhizosphere sample 1; outgrowth in LB	-0.5	+0.3	-0.3	-0.7	-1.8
rhizosphere	rhizosphere sample 5; outgrowth in LB	-0.5	-0.3	-0.0	-0.4	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	-0.0	-0.3	-0.1	-1.6
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.5	-0.2	+0.1	-0.5	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.3	-0.0	+0.0	-0.1	-1.4
rhizosphere	rhizosphere sample 4; outgrowth in LB	-0.3	-0.1	-0.1	-0.4	-0.9
carbon source	Pimelic (C)	-0.4	-0.1	-0.3	-0.3	-0.6
carbon source	Beta-alanine (C)	-0.2	-0.2	-0.3	-0.2	-0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.3	-0.1	+0.1	-0.1	-1.0
carbon source	Pimelic (C)	-0.2	-0.1	-0.3	-0.3	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	+0.4	-0.3	-0.1	-1.1
carbon source	Glycerol (C)	-0.3	-0.1	-0.1	-0.3	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	-0.2	-0.1	-0.3	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.4	-0.1	+0.2	-0.2	-0.7
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-0.4	-0.1	-0.0	-0.1	-0.5
carbon source	Beta-alanine (C)	-0.2	-0.1	-0.1	-0.2	-0.5
carbon source	Octanoic (C)	-0.0	-0.3	-0.7	-0.1	+0.1
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.4	+0.0	+0.4	-0.1	-0.9
carbon source	L-Glutamic (C)	-0.3	-0.0	+0.1	-0.2	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.5	+0.3	-0.2	+0.0	-0.6
soil	soil sample 1; outgrowth in LB	-0.1	-0.1	+0.2	-0.0	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	+0.2	-0.1	-0.0	-0.7
rhizosphere	rhizosphere sample 6; outgrowth in LB	-0.2	+0.0	+0.3	-0.3	-0.5
carbon source	4-Hydroxybenzoic Acid (C)	+0.3	+0.1	+0.1	-0.0	-1.0
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.4	+0.3	+0.2	+0.1	-0.8
root	root EcoFAB sample 2; outgrowth in LB	+0.1	-0.5	+0.3	-0.1	-0.2
nitrogen source	nitrogen source nitrate 5mM	-0.0	-0.5	+0.3	-0.2	-0.0
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	-0.1	+0.3	-0.1	+0.1	-0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.2	+0.1	+0.5	-0.2	-0.5