Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS15860	ABZR87_RS15865	ABZR87_RS15870	ABZR87_RS15875	ABZR87_RS15880
carbon source	4-Hydroxybenzoic Acid (C)	-2.7	-2.9	-3.4	-3.6	-3.3
carbon source	Sebacic (C)	-0.8	-0.8	-1.2	-1.1	-1.1
carbon source	Octanoic (C)	-0.5	-0.5	-0.7	-0.7	-0.7
micoeukaryotes	Dictyostellum sp.mixed culture-2	-0.5	-0.5	-0.2	-0.5	-0.6
carbon source	Octanoic (C)	-0.8	-0.2	-0.2	-0.4	-0.5
carbon source	Dodecandioic (C)	-0.4	-0.6	-0.4	-0.1	-0.4
soil	soil sample 2; outgrowth in LB	+0.3	+0.1	+0.4	+0.3	+0.2
soil	soil sample 3; outgrowth in LB	+0.3	+0.2	+0.4	+0.4	+0.1
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	+0.4	+0.2	+0.4	+0.4	+0.3
soil	soil sample 9; outgrowth in LB	+0.5	+0.3	+0.2	+0.4	+0.4
soil	soil sample 1; outgrowth in LB	+0.3	+0.4	+0.2	+0.5	+0.3
phage	Ra1_0.01	+0.5	+0.6	+0.6	+0.4	+0.4
soil	soil EcoFAB sample 2; outgrowth in LB	+0.6	+0.7	+0.5	+0.7	+0.6
carbon source	Heptanoic (C)	+0.2	+0.6	+0.8	+1.1	+0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.7	+1.1	+0.6	+0.7	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.8	+1.1	+0.4	+0.7	+0.4
phage	Ra3_0.1	+0.7	+0.7	+0.8	+0.7	+0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.8	+0.5	+1.2	+1.0	+0.3
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.1	+0.7	+0.8	+0.7	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.9	+1.0	+0.6	+1.0	+0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.9	+1.0	+1.2	+0.9	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.0	+1.2	+1.0	+1.0	+0.4
carbon source	Heptanoic (C)	+0.8	+0.6	+1.2	+1.2	+0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.0	+0.8	+1.4	+1.3	+0.5
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.4	+1.1	+1.2	+1.2	+0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.3	+1.4	+1.3	+1.1	+0.6
phage	Ra1_0.1	+1.4	+1.4	+1.3	+1.3	+1.3
phage	Ra3_1	+1.4	+1.5	+1.3	+1.3	+1.5
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	+1.7	+1.7	+1.7	+1.8	+1.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+4.3	+4.4	+4.2	+4.4	+1.6