Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS15670 and ABZR87_RS15675 are separated by 109 nucleotidesABZR87_RS15675 and ABZR87_RS15680 are separated by 207 nucleotidesABZR87_RS15680 and ABZR87_RS15685 are separated by 4 nucleotidesABZR87_RS15685 and ABZR87_RS15690 are separated by 94 nucleotides ABZR87_RS15670: ABZR87_RS15670 - dienelactone hydrolase family protein, at 3,304,755 to 3,305,633 _RS15670 ABZR87_RS15675: ABZR87_RS15675 - NAD(P)/FAD-dependent oxidoreductase, at 3,305,743 to 3,307,077 _RS15675 ABZR87_RS15680: ABZR87_RS15680 - DNA polymerase I, at 3,307,285 to 3,310,098 _RS15680 ABZR87_RS15685: ABZR87_RS15685 - TIGR00730 family Rossman fold protein, at 3,310,103 to 3,311,056 _RS15685 ABZR87_RS15690: ABZR87_RS15690 - hypothetical protein, at 3,311,151 to 3,311,579 _RS15690
Group Condition ABZR87_RS15670 ABZR87_RS15675 ABZR87_RS15680 ABZR87_RS15685 ABZR87_RS15690
carbon source Octanoic (C) +0.2 -0.3 -0.7 -4.7 -1.3
carbon source Octanoic (C) -0.1 +0.1 -0.9 -4.1 -1.2
carbon source Sebacic (C) +0.2 +0.2 -0.3 -4.2 -1.0
carbon source Heptanoic (C) +0.1 -0.5 -0.6 -3.3 -0.4
carbon source Heptanoic (C) +0.1 -0.2 -0.6 -3.3 -0.6
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.1 -0.4 -1.9 -1.3
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.1 +0.1 -1.6 -1.4 -0.9
carbon source Dodecandioic (C) +0.1 -0.3 -0.2 -3.1 -0.2
soil soil EcoFAB sample 2; outgrowth in LB -0.0 +0.1 -2.2 -1.1 -0.4
root root EcoFAB sample 2; outgrowth in LB +0.1 -0.2 -2.2 -1.1 +0.1
carbon source Dodecandioic (C) +0.2 +0.1 -0.1 -3.1 -0.1
root root EcoFAB sample 1; outgrowth in LB +0.3 +0.2 -1.8 -1.4 -0.2
soil soil sample 5; outgrowth in LB +0.2 +0.1 -2.1 -0.4 -0.5
soil soil EcoFAB sample 1; outgrowth in LB +0.2 -0.2 -2.3 -0.9 +0.4
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.1 +0.1 -1.8 -1.2 +0.2
rhizosphere rhizosphere sample 1; outgrowth in LB +0.1 +0.1 -1.8 -0.4 -0.4
carbon source Sebacic (C) +0.0 -0.1 -0.2 -1.9 -0.3
no_plant_soil no_plant_soil sample 3; outgrowth in LB +0.1 +0.0 -1.3 -1.1 -0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.1 -0.8 -1.7 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.0 -1.3 -0.7 -0.3
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.0 -0.1 -2.0 -0.9 +0.6
soil soil sample 9; outgrowth in LB -0.2 -0.2 -1.3 -0.5 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 -0.2 -1.7 -1.3 +0.9
carbon source Lauric (C) +0.1 -0.2 -0.4 -0.9 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 +0.2 -0.3 -1.6 -0.2
carbon source Hexanoic (C) +0.2 -0.1 -0.2 -1.1 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.1 -0.9 -1.0 -0.3
rhizosphere rhizosphere sample 7; outgrowth in LB +0.1 +0.3 -1.0 -0.3 -0.6
root root sample 5; outgrowth in LB +0.4 +0.4 -0.8 -0.6 -0.8
rhizosphere rhizosphere sample 3; outgrowth in LB -0.1 +0.1 -0.9 -0.7 +0.9
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