Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS15660 and ABZR87_RS15665 are separated by 66 nucleotidesABZR87_RS15665 and ABZR87_RS15670 are separated by 150 nucleotidesABZR87_RS15670 and ABZR87_RS15675 are separated by 109 nucleotidesABZR87_RS15675 and ABZR87_RS15680 are separated by 207 nucleotides ABZR87_RS15660: ABZR87_RS15660 - sulfurtransferase, at 3,302,844 to 3,303,731 _RS15660 ABZR87_RS15665: ABZR87_RS15665 - ZIP family metal transporter, at 3,303,798 to 3,304,604 _RS15665 ABZR87_RS15670: ABZR87_RS15670 - dienelactone hydrolase family protein, at 3,304,755 to 3,305,633 _RS15670 ABZR87_RS15675: ABZR87_RS15675 - NAD(P)/FAD-dependent oxidoreductase, at 3,305,743 to 3,307,077 _RS15675 ABZR87_RS15680: ABZR87_RS15680 - DNA polymerase I, at 3,307,285 to 3,310,098 _RS15680
Group Condition ABZR87_RS15660 ABZR87_RS15665 ABZR87_RS15670 ABZR87_RS15675 ABZR87_RS15680
carbon source Octanoic (C) -0.1 -3.4 -0.1 +0.1 -0.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -1.5 +0.2 -0.2 -1.7
root root EcoFAB sample 2; outgrowth in LB -0.2 -0.9 +0.1 -0.2 -2.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -1.6 -0.0 -0.0 -1.3
soil soil sample 5; outgrowth in LB -0.0 -1.2 +0.2 +0.1 -2.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -2.4 -0.1 +0.1 -0.8
carbon source Octanoic (C) +0.1 -2.1 +0.2 -0.3 -0.7
soil soil EcoFAB sample 1; outgrowth in LB -0.1 -0.3 +0.2 -0.2 -2.3
carbon source Heptanoic (C) +0.2 -1.9 +0.1 -0.2 -0.6
soil soil sample 9; outgrowth in LB -0.3 -0.6 -0.2 -0.2 -1.3
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.2 -0.7 +0.1 +0.1 -1.6
rhizosphere rhizosphere sample 1; outgrowth in LB -0.1 -0.5 +0.1 +0.1 -1.8
soil soil EcoFAB sample 2; outgrowth in LB -0.1 +0.2 -0.0 +0.1 -2.2
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.2 -1.3 +0.2 +0.1 -1.2
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.2 -0.5 +0.1 +0.0 -1.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -1.8 +0.1 +0.1 -0.7
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.1 +0.0 +0.0 -0.1 -2.0
root root sample 6; outgrowth in LB -0.2 -0.8 +0.0 +0.4 -1.4
carbon source Heptanoic (C) +0.3 -1.2 +0.1 -0.5 -0.6
root root EcoFAB sample 1; outgrowth in LB -0.2 -0.2 +0.3 +0.2 -1.8
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.0 -0.2 +0.1 +0.1 -1.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 -1.5 -0.0 +0.1 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -1.2 +0.2 +0.1 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 -1.4 +0.3 -0.2 -0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.9 +0.2 +0.1 -0.9
rhizosphere rhizosphere sample 7; outgrowth in LB -0.2 -0.5 +0.1 +0.3 -1.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -1.1 +0.1 +0.0 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 -1.1 +0.2 +0.2 -0.9
root root sample 5; outgrowth in LB -0.2 -0.5 +0.4 +0.4 -0.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 -1.2 +0.0 +0.2 -0.3
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ABZR87_RS15665
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