Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS15425 and ABZR87_RS15430 are separated by 21 nucleotidesABZR87_RS15430 and ABZR87_RS15435 overlap by 4 nucleotidesABZR87_RS15435 and ABZR87_RS15440 are separated by 127 nucleotidesABZR87_RS15440 and ABZR87_RS15445 are separated by 22 nucleotides ABZR87_RS15425: ABZR87_RS15425 - ribosome silencing factor, at 3,246,466 to 3,247,107 _RS15425 ABZR87_RS15430: ABZR87_RS15430 - 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH, at 3,247,129 to 3,247,599 _RS15430 ABZR87_RS15435: ABZR87_RS15435 - Maf family protein, at 3,247,596 to 3,248,219 _RS15435 ABZR87_RS15440: ABZR87_RS15440 - ribonuclease G, at 3,248,347 to 3,249,816 _RS15440 ABZR87_RS15445: ABZR87_RS15445 - MFS transporter, at 3,249,839 to 3,251,230 _RS15445
Group Condition ABZR87_RS15425 ABZR87_RS15430 ABZR87_RS15435 ABZR87_RS15440 ABZR87_RS15445
carbon source Heptanoic (C) -0.6 -0.5 +0.1 -3.8 -0.0
carbon source Lauric (C) -0.4 -0.0 -0.1 -3.5 -0.4
carbon source Octanoic (C) -0.9 -0.3 -0.2 -2.9 -0.2
carbon source Octanoic (C) -0.8 -0.0 -0.4 -2.8 -0.2
carbon source propionate (C) -0.3 +0.2 -0.1 -3.7 -0.4
carbon source Heptanoic (C) -0.4 -0.2 +0.1 -3.4 -0.2
carbon source Sebacic (C) -0.8 -0.7 -0.3 -2.4 +0.2
carbon source propionate (C) -0.4 +0.0 +0.1 -2.9 -0.2
carbon source 4-Hydroxybenzoic Acid (C) -1.2 -0.3 -0.2 -1.7 +0.1
carbon source D-Xylose (C) -0.2 -0.1 +0.0 -2.6 -0.3
carbon source adipate (C) -0.0 +0.2 -0.0 -3.0 -0.2
carbon source Trans-2-methyl-2-butenoic (C) +0.0 -0.2 +0.0 -2.8 -0.2
carbon source Glycerol (C) +0.2 +0.2 +0.0 -3.5 +0.2
nitrogen source nitrogen source Ammonium chloride 20mM +0.2 +0.1 +0.1 -3.2 -0.0
carbon source adipate (C) +0.0 -0.2 +0.3 -2.6 -0.3
carbon source Dodecandioic (C) -0.4 -1.0 +0.3 -1.4 -0.4
nitrogen source nitrogen source Ammonium chloride 20mM +0.2 -0.4 +0.2 -2.8 -0.0
carbon source Suberic (C) +0.1 +0.1 -0.2 -2.7 -0.2
carbon source Sebacic (C) -0.8 -0.3 +0.2 -1.7 -0.1
carbon source Trans-2-methyl-2-butenoic (C) +0.3 +0.1 -0.0 -3.1 -0.0
carbon source D-Xylose (C) +0.2 -0.1 +0.0 -2.9 +0.0
carbon source Valeric (C) +0.1 +0.1 +0.2 -2.9 -0.1
carbon source Azelaic (C) -0.6 +0.2 +0.1 -2.1 -0.2
carbon source D-Glucose (C) +0.4 +0.4 +0.1 -3.0 -0.1
carbon source propionate (C) +0.2 +0.1 +0.0 -2.9 +0.3
nitrogen source nitrogen source nitrite 0.5mM -0.2 +0.7 +0.2 -2.7 +0.1
nitrogen source nitrogen source nitrate 20mM -0.0 +0.4 +0.4 -2.6 -0.0
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.6 -0.8 +0.2 -1.0 -0.5
root root sample 6; outgrowth in LB +0.3 -0.8 +0.6 +1.8 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.5 +0.3 +1.6 +0.5
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ABZR87_RS15425
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ABZR87_RS15430
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ABZR87_RS15440
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ABZR87_RS15445
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