Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS15255	ABZR87_RS15260	ABZR87_RS15265	ABZR87_RS15270	ABZR87_RS15275
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-3.7	-0.1	-0.3	N.D.	-1.8
carbon source	Sebacic (C)	-4.6	+0.1	-0.4	N.D.	+0.0
carbon source	4-Hydroxybenzoic Acid (C)	-0.8	+0.1	+0.2	N.D.	-3.4
root	root sample 6; outgrowth in LB	-0.4	-0.2	-0.1	N.D.	-2.8
carbon source	Heptanoic (C)	-2.9	-0.0	-0.6	N.D.	-0.1
carbon source	Octanoic (C)	-2.1	-0.1	-0.4	N.D.	-0.5
soil	soil EcoFAB sample 1; outgrowth in LB	-1.7	+0.2	-0.7	N.D.	-0.6
root	root EcoFAB sample 1; outgrowth in LB	-1.1	-0.2	-0.2	N.D.	-1.0
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.2	-0.1	-0.3	N.D.	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.1	+0.1	-0.1	N.D.	-0.2
carbon source	Heptanoic (C)	-1.7	+0.2	-0.4	N.D.	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.6	-0.1	-0.3	N.D.	-0.9
root	root EcoFAB sample 2; outgrowth in LB	-0.6	+0.1	-0.4	N.D.	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.7	-0.1	-0.2	N.D.	-0.6
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-0.7	+0.1	-0.5	N.D.	-0.4
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	-1.2	+0.1	-0.3	N.D.	+0.2
soil	soil sample 4; outgrowth in LB	-0.8	-0.3	-0.4	N.D.	+0.3
phage	Ra3_0.01	-0.2	+0.1	+0.1	N.D.	-1.2
carbon source	Sebacic (C)	-1.0	+0.1	+0.3	N.D.	-0.3
carbon source	Dodecandioic (C)	-1.1	-0.0	+0.0	N.D.	+0.4
carbon source	Octanoic (C)	-1.1	+0.1	-0.3	N.D.	+0.6
soil	soil sample 5; outgrowth in LB	-0.7	+0.1	-0.4	N.D.	+0.5
phage	Ra3_1	-0.3	+0.3	+0.3	N.D.	-0.8
root	root sample 5; outgrowth in LB	-0.8	+0.1	-0.2	N.D.	+0.6
rhizosphere	rhizosphere sample 4; outgrowth in LB	-0.5	+0.3	-0.5	N.D.	+0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.7	+0.2	-0.5	N.D.	+0.8
carbon source	Azelaic (C)	-1.2	+0.1	+0.3	N.D.	+0.7
nitrogen source	nitrogen source nitrite 0.5mM	-0.4	+0.1	+0.1	N.D.	+1.1
nitrogen source	nitrogen source nitrite 5mM	+0.3	-0.2	+0.2	N.D.	+1.2
nitrogen source	nitrogen source nitrate 20mM	+0.3	+0.0	+0.3	N.D.	+1.1