Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS15110 and ABZR87_RS15115 are separated by 293 nucleotidesABZR87_RS15115 and ABZR87_RS15120 are separated by 153 nucleotidesABZR87_RS15120 and ABZR87_RS15125 are separated by 46 nucleotidesABZR87_RS15125 and ABZR87_RS15130 are separated by 76 nucleotides ABZR87_RS15110: ABZR87_RS15110 - NADP-dependent malic enzyme, at 3,188,617 to 3,190,938 _RS15110 ABZR87_RS15115: ABZR87_RS15115 - DUF4136 domain-containing protein, at 3,191,232 to 3,191,900 _RS15115 ABZR87_RS15120: ABZR87_RS15120 - aminopeptidase N, at 3,192,054 to 3,194,768 _RS15120 ABZR87_RS15125: ABZR87_RS15125 - class 1 fructose-bisphosphatase, at 3,194,815 to 3,195,831 _RS15125 ABZR87_RS15130: ABZR87_RS15130 - tRNA-Thr, at 3,195,908 to 3,195,983 _RS15130
Group Condition ABZR87_RS15110 ABZR87_RS15115 ABZR87_RS15120 ABZR87_RS15125 ABZR87_RS15130
carbon source 3-Hydroxypropionate (C) -5.0 +0.0 +0.0 N.D. N.D.
carbon source 1,2-Propanediol (C) -4.3 +0.0 -0.0 N.D. N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -0.5 -0.5 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) -1.2 +0.2 -0.3 N.D. N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.7 -0.3 -0.2 N.D. N.D.
carbon source Protocatechuic Acid (C) +0.2 -0.2 -1.0 N.D. N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.1 -0.2 -0.5 N.D. N.D.
soil soil EcoFAB sample 2; outgrowth in LB -0.6 +0.2 -0.2 N.D. N.D.
carbon source Lauric (C) -0.3 +0.0 -0.4 N.D. N.D.
carbon source Azelaic (C) -0.4 +0.1 -0.2 N.D. N.D.
rhizosphere rhizosphere sample 8; outgrowth in LB -0.3 -0.2 +0.1 N.D. N.D.
root root sample 6; outgrowth in LB -0.7 -0.0 +0.3 N.D. N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.4 -0.0 +0.3 N.D. N.D.
carbon source Protocatechuic Acid (C) +0.3 +0.1 -0.6 N.D. N.D.
nitrogen source nitrogen source nitrate 20mM +0.3 -0.0 -0.4 N.D. N.D.
nitrogen source nitrogen source nitrate 20mM +0.3 -0.0 -0.4 N.D. N.D.
carbon source Sebacic (C) +0.6 +0.0 -0.6 N.D. N.D.
nitrogen source nitrogen source nitrite 1mM +0.2 +0.2 -0.3 N.D. N.D.
carbon source Octanoic (C) +0.4 +0.2 -0.5 N.D. N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -0.4 +0.2 +0.3 N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM +0.3 +0.2 -0.3 N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM +0.2 +0.2 -0.2 N.D. N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.2 +0.2 -0.2 N.D. N.D.
nitrogen source nitrogen source nitrite 5mM +0.4 +0.2 -0.4 N.D. N.D.
nitrogen source nitrogen source nitrite 5mM +0.6 +0.2 -0.5 N.D. N.D.
carbon source Disodium Glutarate (C) +0.4 +0.1 -0.2 N.D. N.D.
carbon source Heptanoic (C) +0.6 -0.2 +0.1 N.D. N.D.
carbon source Octanoic (C) +0.9 -0.1 -0.2 N.D. N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.2 -0.1 N.D. N.D.
carbon source Heptanoic (C) +0.7 +0.1 +0.1 N.D. N.D.
remove
ABZR87_RS15110
plot		 remove
ABZR87_RS15115
plot		 remove
ABZR87_RS15120		 remove
ABZR87_RS15125
plot		 remove
ABZR87_RS15130
plot