Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS14310 and ABZR87_RS14315 are separated by 73 nucleotidesABZR87_RS14315 and ABZR87_RS14320 overlap by 4 nucleotidesABZR87_RS14320 and ABZR87_RS14325 are separated by 181 nucleotidesABZR87_RS14325 and ABZR87_RS14330 are separated by 141 nucleotides ABZR87_RS14310: ABZR87_RS14310 - peroxidase-related enzyme, at 3,022,352 to 3,022,942 _RS14310 ABZR87_RS14315: ABZR87_RS14315 - xanthine dehydrogenase family protein molybdopterin-binding subunit, at 3,023,016 to 3,025,313 _RS14315 ABZR87_RS14320: ABZR87_RS14320 - (2Fe-2S)-binding protein, at 3,025,310 to 3,025,777 _RS14320 ABZR87_RS14325: ABZR87_RS14325 - tRNA-Ser, at 3,025,959 to 3,026,049 _RS14325 ABZR87_RS14330: ABZR87_RS14330 - hypothetical protein, at 3,026,191 to 3,026,472 _RS14330
Group Condition ABZR87_RS14310 ABZR87_RS14315 ABZR87_RS14320 ABZR87_RS14325 ABZR87_RS14330
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.2 +0.5 -2.5 N.D. -4.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.0 -0.8 N.D. -3.7
rhizosphere rhizosphere sample 6; outgrowth in LB +0.1 +0.2 -0.5 N.D. -3.6
carbon source Azelaic (C) +0.1 +0.3 -0.1 N.D. -4.0
soil soil EcoFAB sample 1; outgrowth in LB +0.5 +0.3 -0.1 N.D. -4.5
carbon source Octanoic (C) -0.1 +0.3 +0.4 N.D. -3.8
root root sample 6; outgrowth in LB -0.0 +0.6 -0.2 N.D. -2.9
carbon source adipate (C) -0.1 +0.1 -0.1 N.D. -2.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 -0.6 +0.4 N.D. -2.4
carbon source Valeric (C) -0.2 +0.1 +0.3 N.D. -2.0
phage Ra3_0.01 -0.1 +0.1 +0.2 N.D. -1.8
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.1 -0.3 +0.3 N.D. -1.8
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB +0.2 +0.2 -0.4 N.D. -1.5
carbon source propionate (C) -0.1 +0.3 -0.3 N.D. -1.3
carbon source Heptanoic (C) -0.2 +0.1 +0.2 N.D. -1.4
carbon source 4-Hydroxybenzoic Acid (C) -0.7 +0.1 -1.4 N.D. +0.9
carbon source Pimelic (C) -0.3 +0.1 +0.4 N.D. -1.1
rhizosphere rhizosphere sample 5; outgrowth in LB -0.0 +0.2 +0.7 N.D. -1.3
phage Ra1_0.1 +1.0 +0.1 -0.2 N.D. -1.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.3 +1.0 N.D. -0.5
rhizosphere rhizosphere sample 9; outgrowth in LB +0.1 +0.4 +0.8 N.D. -1.2
nitrogen source nitrogen source nitrite 0.5mM -0.4 -0.2 +0.7 N.D. +0.7
rhizosphere rhizosphere sample 1; outgrowth in LB +0.3 -0.2 -0.2 N.D. +1.2
rhizosphere rhizosphere sample 3; outgrowth in LB -0.1 +0.1 -0.1 N.D. +1.6
carbon source Octanoic (C) -0.4 +0.2 +0.6 N.D. +1.0
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.5 +0.4 +0.4 N.D. +0.7
nitrogen source nitrogen source nitrite 0.5mM -0.0 +0.0 -0.1 N.D. +2.2
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.1 -0.1 +0.8 N.D. +1.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.0 -0.0 N.D. +2.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.1 +0.5 N.D. +2.4
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ABZR87_RS14315
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