Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS14205 and ABZR87_RS14210 are separated by 90 nucleotidesABZR87_RS14210 and ABZR87_RS14215 are separated by 114 nucleotidesABZR87_RS14215 and ABZR87_RS14220 are separated by 54 nucleotidesABZR87_RS14220 and ABZR87_RS14225 are separated by 669 nucleotides ABZR87_RS14205: ABZR87_RS14205 - DUF1488 domain-containing protein, at 2,999,230 to 2,999,508 _RS14205 ABZR87_RS14210: ABZR87_RS14210 - SpoVR family protein, at 2,999,599 to 3,001,107 _RS14210 ABZR87_RS14215: ABZR87_RS14215 - YeaH/YhbH family protein, at 3,001,222 to 3,002,484 _RS14215 ABZR87_RS14220: ABZR87_RS14220 - PrkA family serine protein kinase, at 3,002,539 to 3,004,461 _RS14220 ABZR87_RS14225: ABZR87_RS14225 - tRNA-Val, at 3,005,131 to 3,005,205 _RS14225
Group Condition ABZR87_RS14205 ABZR87_RS14210 ABZR87_RS14215 ABZR87_RS14220 ABZR87_RS14225
root root EcoFAB sample 1; outgrowth in LB -1.1 -0.6 -0.3 -0.2 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.5 -0.7 -0.2 -0.3 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.2 -0.3 -1.0 -0.5 N.D.
soil soil sample 1; outgrowth in LB -0.2 -0.3 -0.4 -0.2 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.7 -0.3 -0.3 +0.0 N.D.
soil soil sample 8; outgrowth in LB +0.1 -0.4 -0.5 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 -0.3 -0.1 -0.0 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB +0.3 -0.5 -0.5 -0.4 N.D.
carbon source L-Glutamic (C) -0.8 -0.0 -0.1 -0.1 N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB +0.2 -0.5 -0.4 -0.4 N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB +0.3 -0.3 -0.3 -0.4 N.D.
soil soil EcoFAB sample 2; outgrowth in LB +0.2 -0.3 -0.5 -0.1 N.D.
root root sample 4; outgrowth in LB -0.8 -0.0 +0.1 +0.1 N.D.
root root sample 5; outgrowth in LB -0.9 +0.1 +0.3 +0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -0.1 +0.1 +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.1 +0.2 +0.4 N.D.
phage Ra1_0.1 +0.8 -0.1 -0.1 -0.1 N.D.
carbon source Hexanoic (C) +0.8 -0.0 -0.0 -0.2 N.D.
carbon source D-Glucose (C) +0.5 +0.2 +0.3 +0.1 N.D.
carbon source Dodecandioic (C) +1.0 +0.0 +0.1 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +0.2 +0.4 +0.2 N.D.
carbon source Lauric (C) +0.6 +0.3 +0.3 +0.3 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.2 +0.5 +0.7 +0.4 N.D.
carbon source acetate (C) +0.3 +0.6 +0.7 +0.5 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.7 -0.1 +0.1 +0.4 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.5 +0.5 +0.6 +0.6 N.D.
carbon source acetate (C) +0.4 +0.7 +0.7 +0.6 N.D.
carbon source Disodium Glutarate (C) +0.1 +0.9 +1.0 +0.8 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.1 +1.1 +0.9 +1.2 N.D.
carbon source Disodium Glutarate (C) +0.3 +1.0 +1.1 +0.9 N.D.
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