Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS14150 and ABZR87_RS14155 are separated by 347 nucleotidesABZR87_RS14155 and ABZR87_RS14160 are separated by 144 nucleotidesABZR87_RS14160 and ABZR87_RS14165 are separated by 138 nucleotidesABZR87_RS14165 and ABZR87_RS14170 overlap by 2 nucleotides ABZR87_RS14150: ABZR87_RS14150 - glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit, at 2,988,160 to 2,989,296 _RS14150 ABZR87_RS14155: ABZR87_RS14155 - propionate--CoA ligase, at 2,989,644 to 2,991,545 _RS14155 ABZR87_RS14160: ABZR87_RS14160 - transglycosylase SLT domain-containing protein, at 2,991,690 to 2,993,240 _RS14160 ABZR87_RS14165: ABZR87_RS14165 - hydroxyacylglutathione hydrolase, at 2,993,379 to 2,994,218 _RS14165 ABZR87_RS14170: ABZR87_RS14170 - class I SAM-dependent methyltransferase, at 2,994,217 to 2,995,122 _RS14170
Group Condition ABZR87_RS14150 ABZR87_RS14155 ABZR87_RS14160 ABZR87_RS14165 ABZR87_RS14170
phage Ra1_0.1 N.D. +0.0 -1.3 -0.2 N.D.
phage Ra3_1 N.D. +0.1 -1.3 +0.1 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.3 -0.0 -0.7 N.D.
carbon source Octanoic (C) N.D. +0.2 -1.2 +0.0 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. +0.0 -1.2 +0.3 N.D.
phage Ra3_0.1 N.D. -0.1 -0.7 +0.0 N.D.
carbon source Octanoic (C) N.D. +0.1 -1.0 +0.3 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-1 N.D. +0.0 -0.5 +0.2 N.D.
micoeukaryotes C.elegans, mixed culture-1 N.D. +0.1 -0.5 +0.2 N.D.
micoeukaryotes C.elegans, mixed culture-2 N.D. +0.1 -0.5 +0.2 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB N.D. +0.1 -0.4 +0.2 N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-1 N.D. -0.0 -0.4 +0.3 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. +0.0 +0.3 -0.3 N.D.
root root EcoFAB sample 2; outgrowth in LB N.D. +0.2 -0.3 +0.2 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. +0.1 +0.4 -0.2 N.D.
root root sample 6; outgrowth in LB N.D. +0.1 -0.3 +0.5 N.D.
carbon source D-Glucose (C) N.D. +0.0 +0.6 -0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.0 +0.8 -0.3 N.D.
carbon source propionate (C) N.D. +0.0 +0.6 -0.1 N.D.
carbon source Sebacic (C) N.D. +0.2 +0.8 -0.3 N.D.
carbon source propionate (C) N.D. -0.0 +0.7 +0.0 N.D.
carbon source Protocatechuic Acid (C) N.D. +0.1 +1.0 -0.0 N.D.
carbon source Sebacic (C) N.D. +0.1 +1.1 -0.0 N.D.
carbon source Protocatechuic Acid (C) N.D. +0.1 +0.9 +0.2 N.D.
carbon source Dodecandioic (C) N.D. +0.2 +1.2 -0.1 N.D.
carbon source Azelaic (C) N.D. +0.2 +1.4 -0.2 N.D.
carbon source Dodecandioic (C) N.D. +0.2 +1.1 +0.1 N.D.
carbon source L-Glutamic (C) N.D. +1.2 +0.4 -0.2 N.D.
carbon source Heptanoic (C) N.D. +0.1 +1.4 +0.0 N.D.
carbon source Heptanoic (C) N.D. +0.1 +1.1 +0.4 N.D.
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