Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS14100 and ABZR87_RS14105 are separated by 191 nucleotidesABZR87_RS14105 and ABZR87_RS14110 are separated by 108 nucleotidesABZR87_RS14110 and ABZR87_RS14115 are separated by 145 nucleotidesABZR87_RS14115 and ABZR87_RS14120 are separated by 128 nucleotides ABZR87_RS14100: ABZR87_RS14100 - phosphate ABC transporter substrate-binding protein PstS, at 2,976,007 to 2,977,041 _RS14100 ABZR87_RS14105: ABZR87_RS14105 - phosphoglucosamine mutase, at 2,977,233 to 2,978,576 _RS14105 ABZR87_RS14110: ABZR87_RS14110 - dihydropteroate synthase, at 2,978,685 to 2,979,548 _RS14110 ABZR87_RS14115: ABZR87_RS14115 - ATP-dependent zinc metalloprotease FtsH, at 2,979,694 to 2,981,580 _RS14115 ABZR87_RS14120: ABZR87_RS14120 - RlmE family RNA methyltransferase, at 2,981,709 to 2,982,374 _RS14120
Group Condition ABZR87_RS14100 ABZR87_RS14105 ABZR87_RS14110 ABZR87_RS14115 ABZR87_RS14120
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 N.D. N.D. -10.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 N.D. N.D. -10.7 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 N.D. N.D. -10.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 N.D. N.D. -9.8 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 N.D. N.D. -8.8 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 N.D. N.D. -8.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 N.D. N.D. -8.6 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 N.D. N.D. -7.7 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 N.D. N.D. -7.3 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 N.D. N.D. -5.9 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 N.D. N.D. -6.2 N.D.
root root EcoFAB sample 2; outgrowth in LB -0.1 N.D. N.D. -6.1 N.D.
root root EcoFAB sample 1; outgrowth in LB -0.8 N.D. N.D. -5.2 N.D.
soil soil EcoFAB sample 1; outgrowth in LB -1.3 N.D. N.D. -4.5 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.3 N.D. N.D. -5.3 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.4 N.D. N.D. -5.1 N.D.
carbon source Lauric (C) -0.2 N.D. N.D. -5.3 N.D.
soil soil sample 9; outgrowth in LB -0.4 N.D. N.D. -5.0 N.D.
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -1.1 N.D. N.D. -4.3 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.2 N.D. N.D. -5.1 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB -0.2 N.D. N.D. -4.9 N.D.
no_plant_soil no_plant_soil sample 3; outgrowth in LB +0.2 N.D. N.D. -5.3 N.D.
soil soil EcoFAB sample 2; outgrowth in LB -0.5 N.D. N.D. -4.5 N.D.
soil soil sample 2; outgrowth in LB -0.3 N.D. N.D. -4.7 N.D.
soil soil sample 3; outgrowth in LB -0.1 N.D. N.D. -4.9 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.2 N.D. N.D. -4.7 N.D.
carbon source Trans-2-methyl-2-butenoic (C) -0.5 N.D. N.D. -4.2 N.D.
carbon source Heptanoic (C) +0.1 N.D. N.D. -4.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.3 N.D. N.D. -4.4 N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB +0.7 N.D. N.D. -4.1 N.D.
remove
ABZR87_RS14100
plot		 remove
ABZR87_RS14105
plot		 remove
ABZR87_RS14110		 remove
ABZR87_RS14115
plot		 remove
ABZR87_RS14120
plot