Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS14025 and ABZR87_RS14030 are separated by 3 nucleotidesABZR87_RS14030 and ABZR87_RS14035 are separated by 100 nucleotidesABZR87_RS14035 and ABZR87_RS14040 are separated by 2 nucleotidesABZR87_RS14040 and ABZR87_RS14045 are separated by 35 nucleotides ABZR87_RS14025: ABZR87_RS14025 - LysR family transcriptional regulator ArgP, at 2,961,133 to 2,962,029 _RS14025 ABZR87_RS14030: ABZR87_RS14030 - MBL fold metallo-hydrolase, at 2,962,033 to 2,962,893 _RS14030 ABZR87_RS14035: ABZR87_RS14035 - metalloregulator ArsR/SmtB family transcription factor, at 2,962,994 to 2,963,359 _RS14035 ABZR87_RS14040: ABZR87_RS14040 - sulfite exporter TauE/SafE family protein, at 2,963,362 to 2,964,183 _RS14040 ABZR87_RS14045: ABZR87_RS14045 - tRNA-Pro, at 2,964,219 to 2,964,295 _RS14045
Group Condition ABZR87_RS14025 ABZR87_RS14030 ABZR87_RS14035 ABZR87_RS14040 ABZR87_RS14045
soil soil EcoFAB sample 1; outgrowth in LB -0.6 -0.4 -0.3 -0.2 N.D.
root root EcoFAB sample 1; outgrowth in LB -0.7 +0.1 +0.0 -0.7 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.7 -0.3 +0.1 -0.4 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.1 +0.3 -0.7 -0.2 N.D.
carbon source Octanoic (C) +0.6 -0.5 -0.2 -0.5 N.D.
root root sample 6; outgrowth in LB -0.6 -0.0 +0.3 -0.2 N.D.
nitrogen source nitrogen source nitrite 5mM -0.6 +0.2 +0.1 -0.2 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.3 +0.2 -0.4 +0.1 N.D.
carbon source Sebacic (C) -0.6 +0.1 +0.3 +0.1 N.D.
root root EcoFAB sample 2; outgrowth in LB +0.1 +0.3 -0.5 +0.2 N.D.
soil soil sample 7; outgrowth in LB -0.5 +0.2 +0.4 -0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +1.1 -1.1 +0.0 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.5 +0.2 -0.5 -0.0 N.D.
carbon source succinate (C) +0.3 +0.3 +0.1 -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 +1.0 -0.4 -0.3 N.D.
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.5 +0.1 +0.8 +0.0 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.3 +0.3 +0.3 +0.1 N.D.
root root sample 4; outgrowth in LB +0.2 +0.2 +0.5 -0.2 N.D.
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.1 +0.2 +0.6 +0.1 N.D.
control NoPredeControl +0.3 -0.0 +0.3 +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 +1.8 -1.0 -0.1 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB +0.9 +0.3 +0.3 -0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +2.3 -0.7 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +2.0 -0.8 +0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 +2.4 -0.9 -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.0 +2.5 -0.9 -0.2 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +3.1 -1.4 +1.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 +3.2 -0.9 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +4.8 -0.6 +0.6 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +8.1 -1.3 -0.2 N.D.
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