Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABZR87_RS14015	ABZR87_RS14020	ABZR87_RS14025	ABZR87_RS14030	ABZR87_RS14035
soil	soil EcoFAB sample 1; outgrowth in LB	N.D.	-0.3	-0.6	-0.4	-0.3
nitrogen source	nitrogen source nitrite 1mM	N.D.	-0.3	-0.4	-0.1	-0.2
carbon source	4-Hydroxybenzoic Acid (C)	N.D.	-0.1	-0.7	-0.3	+0.1
root	root sample 6; outgrowth in LB	N.D.	-0.3	-0.6	-0.0	+0.3
nitrogen source	nitrogen source nitrite 5mM	N.D.	-0.1	-0.6	+0.2	+0.1
carbon source	Sebacic (C)	N.D.	-0.1	-0.6	+0.1	+0.3
rhizosphere	rhizosphere sample 1; outgrowth in LB	N.D.	+0.2	-0.3	+0.2	-0.4
root	root EcoFAB sample 2; outgrowth in LB	N.D.	-0.1	+0.1	+0.3	-0.5
root	root EcoFAB sample 1; outgrowth in LB	N.D.	+0.5	-0.7	+0.1	+0.0
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	N.D.	+0.5	-0.1	+0.3	-0.7
carbon source	Octanoic (C)	N.D.	+0.2	+0.6	-0.5	-0.2
soil	soil sample 7; outgrowth in LB	N.D.	+0.1	-0.5	+0.2	+0.4
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	N.D.	+0.1	+0.5	+0.2	-0.5
carbon source	succinate (C)	N.D.	-0.3	+0.3	+0.3	+0.1
root	root sample 4; outgrowth in LB	N.D.	-0.4	+0.2	+0.2	+0.5
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	N.D.	+0.1	-0.5	+0.1	+0.8
rhizosphere	rhizosphere sample 8; outgrowth in LB	N.D.	+0.1	-0.2	+0.3	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-0.0	-0.0	+1.0	-0.4
rhizosphere	rhizosphere sample 7; outgrowth in LB	N.D.	+0.4	-0.3	+0.3	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.8	+0.2	+1.1	-1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-0.3	-0.3	+3.1	-1.4
rhizosphere	rhizosphere sample 3; outgrowth in LB	N.D.	-0.1	+0.9	+0.3	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.1	+0.5	+1.8	-1.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.2	+0.4	+2.0	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.0	+0.2	+2.3	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.2	+0.7	+2.4	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.1	+1.0	+2.5	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.1	+0.6	+3.2	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-0.0	+0.3	+4.8	-0.6
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.1	-0.3	+8.1	-1.3