Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS13795 and ABZR87_RS13800 are separated by 94 nucleotidesABZR87_RS13800 and ABZR87_RS13805 are separated by 82 nucleotidesABZR87_RS13805 and ABZR87_RS13810 are separated by 240 nucleotidesABZR87_RS13810 and ABZR87_RS13815 overlap by 1 nucleotides ABZR87_RS13795: ABZR87_RS13795 - FKBP-type peptidyl-prolyl cis-trans isomerase, at 2,909,653 to 2,910,066 _RS13795 ABZR87_RS13800: ABZR87_RS13800 - MFS transporter, at 2,910,161 to 2,912,068 _RS13800 ABZR87_RS13805: ABZR87_RS13805 - CBS domain-containing protein, at 2,912,151 to 2,912,606 _RS13805 ABZR87_RS13810: ABZR87_RS13810 - O-acetylhomoserine aminocarboxypropyltransferase, at 2,912,847 to 2,914,178 _RS13810 ABZR87_RS13815: ABZR87_RS13815 - alpha/beta hydrolase, at 2,914,178 to 2,915,002 _RS13815
Group Condition ABZR87_RS13795 ABZR87_RS13800 ABZR87_RS13805 ABZR87_RS13810 ABZR87_RS13815
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.2 -3.5 -0.2 -0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.2 -0.3 -2.5 -0.0 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -0.4 -1.5 +0.0 -0.8
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.0 -0.1 -1.6 -0.4 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -0.1 -1.5 -0.1 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 +0.0 -1.4 -0.2 -0.2
soil soil EcoFAB sample 1; outgrowth in LB +0.1 -0.3 -1.6 -0.3 -0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.2 -1.2 +0.0 -1.0
root root EcoFAB sample 2; outgrowth in LB -0.1 -0.4 -0.7 -0.2 -0.7
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB +0.0 -0.2 -1.6 -0.1 -0.3
rhizosphere rhizosphere sample 3; outgrowth in LB +0.3 -0.0 -0.4 -0.1 -1.9
soil soil EcoFAB sample 2; outgrowth in LB -0.8 -0.2 -1.2 -0.1 +0.1
root root EcoFAB sample 1; outgrowth in LB +0.1 -0.5 -1.3 -0.1 -0.4
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.2 -0.2 -1.8 -0.0 +0.2
no_plant_soil no_plant_soil sample 2; outgrowth in LB -0.2 -0.3 -1.4 -0.1 -0.0
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.0 -1.6 +0.3 -0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.2 -1.8 +0.1 +0.1
root root sample 6; outgrowth in LB -1.2 -0.3 +0.1 -0.0 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -0.1 -1.7 +0.1 +0.6
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.1 -0.3 -1.2 +0.0 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -0.4 -0.5 -0.4 -0.4
soil soil sample 2; outgrowth in LB +0.3 -0.2 -0.6 +0.1 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 -0.2 -1.0 +0.3 -0.2
carbon source Lauric (C) +0.2 -0.8 -0.8 +0.4 -0.0
carbon source Azelaic (C) -0.3 +0.5 -1.1 +0.2 -0.2
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.1 -0.4 -1.2 +0.2 +0.5
carbon source Octanoic (C) +0.4 +0.1 -1.6 +0.3 +0.8
carbon source Octanoic (C) +0.6 -0.2 -0.6 +0.6 +0.4
carbon source Disodium Glutarate (C) +0.1 -0.1 +1.9 -0.1 -0.3
carbon source Disodium Glutarate (C) +0.3 -0.1 +2.1 -0.1 -0.2
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ABZR87_RS13795
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ABZR87_RS13800
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ABZR87_RS13810
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ABZR87_RS13815
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