Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS13175	ABZR87_RS13180	ABZR87_RS13185	ABZR87_RS13190	ABZR87_RS13195
carbon source	Beta-alanine (C)	-5.4	-0.3	-0.2	-0.1	-0.2
carbon source	Lauric (C)	-0.7	-2.9	-3.0	+0.8	-0.1
carbon source	Beta-alanine (C)	-5.4	-0.1	-0.2	-0.1	-0.2
nitrogen source	nitrogen source nitrite 0.5mM	-5.4	+0.2	+0.2	+0.5	-0.4
nitrogen source	nitrogen source nitrate 5mM	-4.5	-0.0	-0.2	+0.1	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.2	-0.0	-0.4	-0.9	-0.2
carbon source	Glycerol (C)	-4.2	-0.1	-0.2	+0.1	-0.1
nitrogen source	nitrogen source nitrate 20mM	-4.4	-0.1	-0.3	+0.4	-0.1
nitrogen source	nitrogen source nitrate 5mM	-4.3	+0.0	-0.1	+0.1	+0.0
carbon source	Glycerol (C)	-3.3	-0.2	-0.2	-0.0	-0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.0	+0.0	-0.1	-0.5	-0.1
carbon source	D-Galactose (C)	-3.7	-0.1	-0.1	+0.1	-0.1
carbon source	Octanoic (C)	-0.9	-0.6	-0.9	-0.8	-0.5
soil	soil sample 2; outgrowth in LB	-3.3	+0.2	+0.2	-0.3	-0.2
carbon source	4-Hydroxybenzoic Acid (C)	-2.5	-0.1	-0.3	-0.4	-0.2
nitrogen source	nitrogen source nitrite 5mM	-3.1	+0.0	-0.3	+0.2	-0.2
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-3.0	+0.1	+0.2	-0.1	-0.2
carbon source	Pimelic (C)	-3.0	-0.1	-0.1	+0.3	-0.2
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-3.1	-0.1	-0.0	+0.1	+0.2
phage	Ra1_0.01	-3.2	-0.1	+0.0	+0.2	+0.3
nitrogen source	nitrogen source nitrate 20mM	-2.7	+0.1	-0.1	+0.2	-0.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.3	+0.1	+0.2	-0.3	+0.6
soil	soil EcoFAB sample 2; outgrowth in LB	-3.1	-0.0	+0.1	+0.2	+0.4
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.8	-0.3	+0.2	-1.0	+0.7
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-3.6	+0.8	+0.8	-0.0	-0.1
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	-2.5	+0.6	+0.4	-0.3	+0.1
soil	soil EcoFAB sample 1; outgrowth in LB	-2.9	+0.0	+0.3	+0.5	+0.5
carbon source	Octanoic (C)	+0.7	-0.8	-0.8	-0.7	+0.2
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-2.3	+0.7	+0.6	-0.1	-0.2
phage	Ra1_0.1	-1.3	-0.1	-0.6	+0.9	+0.2