Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS13045 and ABZR87_RS13050 overlap by 4 nucleotidesABZR87_RS13050 and ABZR87_RS13055 overlap by 4 nucleotidesABZR87_RS13055 and ABZR87_RS13060 are separated by 2 nucleotidesABZR87_RS13060 and ABZR87_RS13065 overlap by 4 nucleotides ABZR87_RS13045: ABZR87_RS13045 - phage tail assembly protein, at 2,769,488 to 2,769,814 _RS13045 ABZR87_RS13050: ABZR87_RS13050 - GpE family phage tail protein, at 2,769,811 to 2,769,912 _RS13050 ABZR87_RS13055: ABZR87_RS13055 - hypothetical protein, at 2,769,909 to 2,772,548 _RS13055 ABZR87_RS13060: ABZR87_RS13060 - phage tail protein, at 2,772,551 to 2,772,973 _RS13060 ABZR87_RS13065: ABZR87_RS13065 - phage late control D family protein, at 2,772,970 to 2,774,094 _RS13065
Group Condition ABZR87_RS13045 ABZR87_RS13050 ABZR87_RS13055 ABZR87_RS13060 ABZR87_RS13065
carbon source Azelaic (C) -0.5 -4.3 -0.2 -0.2 -0.1
nitrogen source nitrogen source nitrate 20mM +0.3 -3.7 +0.1 +0.1 -0.5
soil soil EcoFAB sample 2; outgrowth in LB -1.1 -2.6 +0.2 +0.3 -0.1
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -3.5 -0.0 +0.0 +0.4
carbon source Valeric (C) -0.6 -2.1 +0.1 +0.2 -0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.3 -2.6 -0.1 -0.2 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -2.4 +0.2 -0.1 -0.2
rhizosphere rhizosphere sample 3; outgrowth in LB +0.5 -3.2 -0.3 +0.5 +0.1
carbon source Sebacic (C) -0.2 -2.4 +0.0 +0.3 -0.0
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.4 -2.0 -0.2 +0.2 +0.2
rhizosphere rhizosphere sample 9; outgrowth in LB -0.8 -1.4 +0.1 +0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -1.9 -0.1 -0.2 +0.1
carbon source Octanoic (C) +0.3 -1.9 -0.1 -0.1 -0.2
carbon source Suberic (C) -0.7 -0.8 -0.0 -0.3 -0.1
root root EcoFAB sample 1; outgrowth in LB -0.2 -0.9 -0.1 -0.6 +0.1
phage Ra3_1 +0.3 -1.4 +0.2 +0.1 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 -1.6 +0.3 +0.2 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 +0.5 +0.1 -0.3 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.7 -0.8 -0.1 -0.2 -0.1
nitrogen source nitrogen source nitrate 20mM +0.5 -1.2 -0.0 +0.1 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -1.1 +0.4 +0.1 -0.1
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.9 +0.8 -0.1 +0.2 +0.1
soil soil sample 3; outgrowth in LB -0.7 +1.1 -0.1 -0.1 +0.0
carbon source Octanoic (C) -0.9 +1.0 +0.1 -0.0 +0.1
root root sample 5; outgrowth in LB +0.7 +0.9 -0.2 -0.6 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 +1.3 +0.1 -0.0 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.4 +0.2 +0.0 -0.1 -0.3
soil soil EcoFAB sample 1; outgrowth in LB +1.0 +0.7 +0.1 -0.3 -0.3
root root EcoFAB sample 2; outgrowth in LB +1.9 +0.5 -0.1 -0.3 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +2.0 +1.1 +0.9 +0.1 +0.5
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ABZR87_RS13045
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ABZR87_RS13050
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ABZR87_RS13060
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ABZR87_RS13065
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