Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS13030	ABZR87_RS13035	ABZR87_RS13040	ABZR87_RS13045	ABZR87_RS13050
carbon source	Azelaic (C)	+0.0	+0.1	-0.2	-0.5	-4.3
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.1	-0.8	-0.4	+0.3	-3.5
soil	soil EcoFAB sample 2; outgrowth in LB	-0.4	+0.4	-0.3	-1.1	-2.6
nitrogen source	nitrogen source nitrate 20mM	-0.2	+0.0	+0.3	+0.3	-3.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.4	-0.1	-0.3	-0.0	-1.9
soil	soil sample 9; outgrowth in LB	-0.3	-0.4	-0.6	-0.5	-0.8
carbon source	Sebacic (C)	+0.0	-0.3	+0.3	-0.2	-2.4
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-0.1	+0.0	+0.0	-0.4	-2.0
carbon source	Octanoic (C)	-0.4	-0.2	-0.2	+0.3	-1.9
carbon source	Octanoic (C)	-0.4	-1.1	-1.0	-0.9	+1.0
carbon source	4-Hydroxybenzoic Acid (C)	-0.2	+0.1	+0.1	+0.3	-2.6
carbon source	Valeric (C)	+0.3	+0.1	+0.3	-0.6	-2.1
rhizosphere	rhizosphere sample 3; outgrowth in LB	+0.7	-0.3	+0.4	+0.5	-3.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	-0.0	+0.3	-0.1	-2.4
rhizosphere	rhizosphere sample 9; outgrowth in LB	-0.3	+0.5	+0.3	-0.8	-1.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.2	-0.3	-0.6	+0.7	-0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.5	+0.7	-0.7	+0.6	-1.6
phage	Ra3_1	-0.1	+0.2	+0.6	+0.3	-1.4
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	+0.2	-0.3	+0.0	-0.9	+0.8
rhizosphere	rhizosphere sample 2; outgrowth in LB	-0.3	-0.1	-0.4	-0.5	+1.1
soil	soil sample 3; outgrowth in LB	+0.0	-0.3	-0.1	-0.7	+1.1
nitrogen source	nitrogen source nitrate 20mM	+0.3	+0.3	+0.1	+0.5	-1.2
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-0.4	+0.3	-0.6	-0.6	+1.3
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-0.3	-0.1	-0.3	-0.1	+1.3
rhizosphere	rhizosphere sample 7; outgrowth in LB	-0.5	-0.4	+0.2	+0.5	+0.8
soil	soil EcoFAB sample 1; outgrowth in LB	-0.8	-0.0	-0.3	+1.0	+0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.3	+0.4	-0.9	+1.4	+0.2
root	root EcoFAB sample 2; outgrowth in LB	-0.9	+0.5	-0.2	+1.9	+0.5
root	root sample 5; outgrowth in LB	+1.2	-0.6	-0.2	+0.7	+0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+1.6	+0.3	-0.2	+2.0	+1.1