Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS12620 and ABZR87_RS12625 are separated by 218 nucleotidesABZR87_RS12625 and ABZR87_RS12630 are separated by 343 nucleotidesABZR87_RS12630 and ABZR87_RS12635 are separated by 128 nucleotidesABZR87_RS12635 and ABZR87_RS12640 are separated by 43 nucleotides ABZR87_RS12620: ABZR87_RS12620 - branched-chain amino acid ABC transporter substrate-binding protein, at 2,673,302 to 2,674,558 _RS12620 ABZR87_RS12625: ABZR87_RS12625 - 3-(methylthio)propionyl-CoA ligase, at 2,674,777 to 2,676,405 _RS12625 ABZR87_RS12630: ABZR87_RS12630 - protein adenylyltransferase SelO, at 2,676,749 to 2,678,338 _RS12630 ABZR87_RS12635: ABZR87_RS12635 - peptide-methionine (R)-S-oxide reductase MsrB, at 2,678,467 to 2,678,853 _RS12635 ABZR87_RS12640: ABZR87_RS12640 - septation protein A, at 2,678,897 to 2,679,469 _RS12640
Group Condition ABZR87_RS12620 ABZR87_RS12625 ABZR87_RS12630 ABZR87_RS12635 ABZR87_RS12640
carbon source Pimelic (C) -3.5 -2.8 +0.5 +0.4 N.D.
carbon source Pimelic (C) -3.2 -2.5 +0.6 +0.5 N.D.
carbon source Suberic (C) -1.5 -0.8 +0.1 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.3 -0.8 -0.9 N.D.
carbon source L-Glutamic (C) +0.1 -0.8 -0.1 -0.6 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 -0.2 -0.1 -0.7 N.D.
carbon source Pimelic (C) -0.6 -0.7 +0.1 +0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.3 -0.3 -1.0 N.D.
carbon source adipate (C) -0.8 -0.8 +0.2 +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.1 +0.0 -0.7 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB +0.1 +0.1 -0.1 -0.8 N.D.
carbon source Heptanoic (C) -0.6 -0.5 +0.4 +0.1 N.D.
carbon source Heptanoic (C) -0.6 -0.6 +0.1 +0.5 N.D.
carbon source adipate (C) -0.7 -0.7 +0.3 +0.6 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.2 +0.3 -0.7 -0.3 N.D.
carbon source Pimelic (C) -0.5 -0.5 +0.3 +0.2 N.D.
carbon source Sebacic (C) -0.0 -0.8 +0.4 -0.1 N.D.
root root EcoFAB sample 1; outgrowth in LB +0.2 +0.3 -0.4 -0.5 N.D.
carbon source Octanoic (C) -0.5 -0.9 +0.3 +0.9 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.3 +0.1 -0.6 N.D.
carbon source Lauric (C) -0.2 -0.5 +0.5 +0.2 N.D.
carbon source Sebacic (C) -0.3 -0.5 +0.4 +0.5 N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.2 -0.2 +0.1 +0.5 N.D.
carbon source Disodium Glutarate (C) -0.3 -0.2 +0.3 +0.4 N.D.
carbon source Octanoic (C) -0.6 -0.6 +0.6 +0.9 N.D.
root root sample 5; outgrowth in LB +0.5 +0.1 +0.2 -0.3 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB +0.0 +0.2 -0.3 +0.7 N.D.
carbon source Azelaic (C) -0.3 +0.1 +0.2 +0.7 N.D.
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.0 -0.1 +0.1 +0.8 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.6 +0.1 -0.1 N.D.
remove
ABZR87_RS12620
plot		 remove
ABZR87_RS12625
plot		 remove
ABZR87_RS12630		 remove
ABZR87_RS12635
plot		 remove
ABZR87_RS12640
plot