Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS12310 and ABZR87_RS12315 overlap by 4 nucleotidesABZR87_RS12315 and ABZR87_RS12320 are separated by 45 nucleotidesABZR87_RS12320 and ABZR87_RS12325 overlap by 4 nucleotidesABZR87_RS12325 and ABZR87_RS12330 are separated by 89 nucleotides ABZR87_RS12310: ABZR87_RS12310 - Rieske 2Fe-2S domain-containing protein, at 2,612,008 to 2,613,366 _RS12310 ABZR87_RS12315: ABZR87_RS12315 - benzoate 1,2-dioxygenase small subunit, at 2,613,363 to 2,613,851 _RS12315 ABZR87_RS12320: ABZR87_RS12320 - benzoate 1,2-dioxygenase electron transfer component BenC, at 2,613,897 to 2,614,925 _RS12320 ABZR87_RS12325: ABZR87_RS12325 - 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase, at 2,614,922 to 2,615,704 _RS12325 ABZR87_RS12330: ABZR87_RS12330 - hypothetical protein, at 2,615,794 to 2,615,961 _RS12330
Group Condition ABZR87_RS12310 ABZR87_RS12315 ABZR87_RS12320 ABZR87_RS12325 ABZR87_RS12330
carbon source Octanoic (C) -0.4 -1.3 +0.2 -1.1 -1.4
rhizosphere rhizosphere sample 8; outgrowth in LB +0.1 +0.3 +0.2 -0.2 -1.6
carbon source Octanoic (C) -0.2 +0.1 +0.0 -0.7 -0.6
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.0 +0.0 -0.3 +0.0 -0.9
root root EcoFAB sample 1; outgrowth in LB +0.1 +0.2 -0.2 -0.1 -1.3
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.1 +0.2 -0.8 +0.1 -0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.2 +0.1 -0.0 -1.5
nitrogen source nitrogen source nitrate 5mM -0.0 +0.3 -0.4 +0.1 -1.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.5 -0.1 -0.3 -0.3 -0.7
carbon source Sebacic (C) +0.0 +0.7 -0.4 +0.0 -1.2
root root sample 6; outgrowth in LB +0.0 -0.2 -0.3 +0.3 -0.7
nitrogen source nitrogen source nitrite 5mM -0.2 +0.2 -0.2 +0.1 -0.8
nitrogen source nitrogen source nitrite 0.5mM +0.0 -0.2 -0.2 +0.3 -0.6
carbon source Azelaic (C) -0.1 +0.2 -0.5 +0.2 -0.4
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.2 -0.4 +0.1 +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 -0.4 +0.2 -0.2 +0.3
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.1 -0.4 +0.2 -0.1 +0.5
soil soil EcoFAB sample 1; outgrowth in LB +0.1 +0.5 +0.3 -0.0 -0.6
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.1 +1.0 -0.4 -0.4
carbon source Lauric (C) -0.1 -0.2 +0.3 +0.1 +0.5
carbon source succinate (C) +0.1 -0.3 +0.2 +0.1 +0.5
carbon source Sebacic (C) +0.0 -0.2 +0.2 +0.0 +0.7
carbon source adipate (C) +0.2 -0.2 +0.3 +0.2 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.0 -0.3 -0.3 +0.2
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.0 +0.2 -0.1 +0.0 +0.8
soil soil sample 9; outgrowth in LB +0.1 +0.0 +0.3 -0.1 +0.7
carbon source L-Glutamic (C) +0.3 +0.1 +0.3 -0.0 +0.5
root root sample 5; outgrowth in LB -0.3 +1.0 +0.1 -0.4 +0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.1 -0.0 +0.2 +0.9
rhizosphere rhizosphere sample 9; outgrowth in LB +0.5 -0.0 +0.4 +0.2 +0.8
remove
ABZR87_RS12310
plot		 remove
ABZR87_RS12315
plot		 remove
ABZR87_RS12320		 remove
ABZR87_RS12325
plot		 remove
ABZR87_RS12330
plot