Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS12260	ABZR87_RS12265	ABZR87_RS12270	ABZR87_RS12275	ABZR87_RS12280
root	root EcoFAB sample 2; outgrowth in LB	-1.4	+0.0	-0.0	-0.5	-0.2
phage	Ra3_1	-1.4	-0.4	+0.0	+0.0	-0.0
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.9	+0.2	-0.2	-0.1	+0.3
carbon source	Octanoic (C)	-0.3	+0.3	-0.2	-1.1	-0.1
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-0.6	-0.5	-0.1	+0.2	-0.0
carbon source	Heptanoic (C)	-0.0	-0.1	-0.6	-0.5	+0.3
carbon source	Octanoic (C)	-0.3	+0.1	-0.2	+0.2	-0.7
nitrogen source	nitrogen source nitrate 20mM	-0.9	+0.2	+0.2	-0.2	+0.1
carbon source	Valeric (C)	+0.2	+0.0	-0.4	-0.7	+0.3
carbon source	Heptanoic (C)	+0.0	+0.1	-0.6	-0.5	+0.5
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-0.7	-0.3	+0.1	+0.2	+0.1
carbon source	Pimelic (C)	-0.7	-0.3	-0.2	-0.5	+1.3
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	+0.7	-0.2	-0.1	-0.7	+0.2
carbon source	Pimelic (C)	-0.2	-0.3	-0.7	-0.3	+1.5
root	root sample 5; outgrowth in LB	-0.6	+0.1	+1.0	+0.0	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.8	-0.4	-0.1	+0.2	-0.0
carbon source	Hexanoic (C)	-0.5	+0.0	-0.5	-0.1	+1.4
carbon source	Dodecandioic (C)	-0.6	-0.0	-0.4	-1.7	+3.2
rhizosphere	rhizosphere sample 4; outgrowth in LB	+0.5	-0.1	+0.3	-0.2	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.9	-0.7	-0.2	+0.5	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+0.9	-0.3	-0.1	+0.3	+0.1
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	+0.4	-0.2	+0.1	+0.6	+0.1
carbon source	Azelaic (C)	+0.3	+0.2	-0.5	+0.6	+0.6
nitrogen source	nitrogen source nitrite 0.5mM	+1.0	+0.1	+0.2	+0.1	-0.2
carbon source	Sebacic (C)	-1.1	-0.1	-0.4	+0.7	+2.2
carbon source	Dodecandioic (C)	-0.4	-0.2	-0.5	-1.0	+3.4
root	root sample 4; outgrowth in LB	+1.0	-0.1	+0.5	-0.1	+0.2
carbon source	Hexanoic (C)	+0.4	+0.1	+0.1	+0.0	+1.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+2.0	+0.1	-0.0	+0.2	+0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	+2.0	-0.0	+0.5	+0.1	+0.2