Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS12170 and ABZR87_RS12175 are separated by 17 nucleotidesABZR87_RS12175 and ABZR87_RS12180 are separated by 126 nucleotidesABZR87_RS12180 and ABZR87_RS12185 are separated by 152 nucleotidesABZR87_RS12185 and ABZR87_RS12190 are separated by 71 nucleotides ABZR87_RS12170: ABZR87_RS12170 - acetyl-CoA hydrolase/transferase family protein, at 2,579,733 to 2,581,280 _RS12170 ABZR87_RS12175: ABZR87_RS12175 - LysR family transcriptional regulator, at 2,581,298 to 2,582,191 _RS12175 ABZR87_RS12180: ABZR87_RS12180 - hypothetical protein, at 2,582,318 to 2,582,848 _RS12180 ABZR87_RS12185: ABZR87_RS12185 - aldehyde dehydrogenase family protein, at 2,583,001 to 2,584,437 _RS12185 ABZR87_RS12190: ABZR87_RS12190 - DUF1289 domain-containing protein, at 2,584,509 to 2,584,742 _RS12190
Group Condition ABZR87_RS12170 ABZR87_RS12175 ABZR87_RS12180 ABZR87_RS12185 ABZR87_RS12190
carbon source Octanoic (C) -0.1 -0.8 -0.7 +0.1 N.D.
carbon source Azelaic (C) -0.0 -1.0 -0.3 +0.1 N.D.
carbon source acetate (C) -0.5 -0.4 -0.3 +0.1 N.D.
carbon source acetate (C) -0.5 -0.4 -0.2 +0.1 N.D.
nitrogen source nitrogen source nitrite 5mM +0.1 -0.4 -0.5 -0.0 N.D.
nitrogen source nitrogen source nitrate 20mM +0.1 -0.8 +0.0 -0.0 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.6 -0.1 +0.1 N.D.
nitrogen source nitrogen source nitrate 5mM +0.1 -0.5 +0.1 -0.2 N.D.
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -1.0 +0.1 +0.3 N.D.
soil soil EcoFAB sample 1; outgrowth in LB -0.1 -0.8 +0.4 +0.3 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.4 -0.5 +0.3 +0.4 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.0 -0.6 +0.4 -0.0 N.D.
carbon source L-Glutamic (C) +0.0 +0.5 -0.5 -0.1 N.D.
root root sample 6; outgrowth in LB +0.2 -0.4 -0.2 +0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.5 -0.3 +0.4 N.D.
root root sample 5; outgrowth in LB +0.3 -0.6 +0.1 +0.1 N.D.
nitrogen source nitrogen source nitrite 0.5mM -0.1 -0.6 +0.6 +0.0 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.4 -0.0 +0.6 -0.3 N.D.
carbon source D-Glucose (C) +0.2 +0.2 -0.5 +0.2 N.D.
rhizosphere rhizosphere sample 3; outgrowth in LB -0.1 -0.3 +0.2 +0.4 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.1 -0.1 +0.4 +0.3 N.D.
soil soil sample 9; outgrowth in LB -0.1 +0.1 +0.6 +0.1 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 -0.0 +0.8 +0.1 N.D.
soil soil sample 1; outgrowth in LB +0.1 -0.3 +0.6 +0.2 N.D.
carbon source adipate (C) +0.1 +0.5 -0.2 +0.2 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.0 -0.1 +0.9 +0.1 N.D.
micoeukaryotes C.elegans, mixed culture-1 +0.2 +0.4 +0.1 +0.3 N.D.
root root sample 4; outgrowth in LB +0.2 -0.0 +0.4 +0.6 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.1 +0.6 +0.5 +0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +0.4 +1.0 -0.3 N.D.
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