Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS11840 and ABZR87_RS11845 are separated by 52 nucleotidesABZR87_RS11845 and ABZR87_RS11850 are separated by 3 nucleotidesABZR87_RS11850 and ABZR87_RS11855 are separated by 11 nucleotidesABZR87_RS11855 and ABZR87_RS11860 are separated by 86 nucleotides ABZR87_RS11840: ABZR87_RS11840 - ribosome recycling factor, at 2,515,019 to 2,515,579 _RS11840 ABZR87_RS11845: ABZR87_RS11845 - polyprenyl diphosphate synthase, at 2,515,632 to 2,516,408 _RS11845 ABZR87_RS11850: ABZR87_RS11850 - phosphatidate cytidylyltransferase, at 2,516,412 to 2,517,230 _RS11850 ABZR87_RS11855: ABZR87_RS11855 - 1-deoxy-D-xylulose-5-phosphate reductoisomerase, at 2,517,242 to 2,518,432 _RS11855 ABZR87_RS11860: ABZR87_RS11860 - RIP metalloprotease RseP, at 2,518,519 to 2,519,907 _RS11860
Group Condition ABZR87_RS11840 ABZR87_RS11845 ABZR87_RS11850 ABZR87_RS11855 ABZR87_RS11860
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. N.D. -3.7
phage Ra1_0.1 N.D. N.D. N.D. N.D. -3.1
phage Ra3_1 N.D. N.D. N.D. N.D. -2.9
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. N.D. -2.2
phage Ra3_0.1 N.D. N.D. N.D. N.D. -1.5
phage Ra1_0.01 N.D. N.D. N.D. N.D. -1.1
nitrogen source nitrogen source nitrate 5mM N.D. N.D. N.D. N.D. -1.0
carbon source Pimelic (C) N.D. N.D. N.D. N.D. -0.8
nitrogen source nitrogen source nitrite 0.5mM N.D. N.D. N.D. N.D. -0.8
carbon source propionate (C) N.D. N.D. N.D. N.D. -0.8
carbon source Lauric (C) N.D. N.D. N.D. N.D. -0.7
nitrogen source nitrogen source Ammonium chloride 20mM N.D. N.D. N.D. N.D. -0.6
carbon source Pimelic (C) N.D. N.D. N.D. N.D. -0.6
nitrogen source nitrogen source nitrite 1mM N.D. N.D. N.D. N.D. -0.6
nitrogen source nitrogen source nitrate 20mM N.D. N.D. N.D. N.D. -0.5
rhizosphere rhizosphere sample 3; outgrowth in LB N.D. N.D. N.D. N.D. +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.5
carbon source Glycerol (C) N.D. N.D. N.D. N.D. +0.6
soil soil sample 5; outgrowth in LB N.D. N.D. N.D. N.D. +0.6
micoeukaryotes Acanthamoeba sp., muxed culture-1 N.D. N.D. N.D. N.D. +0.6
carbon source Heptanoic (C) N.D. N.D. N.D. N.D. +0.6
carbon source L-Glutamic (C) N.D. N.D. N.D. N.D. +0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.6
carbon source butyrate (C) N.D. N.D. N.D. N.D. +0.7
carbon source D-Galactose (C) N.D. N.D. N.D. N.D. +0.7
carbon source Sebacic (C) N.D. N.D. N.D. N.D. +0.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. N.D. +0.9
soil soil EcoFAB sample 1; outgrowth in LB N.D. N.D. N.D. N.D. +1.0
carbon source Octanoic (C) N.D. N.D. N.D. N.D. +2.6
carbon source Octanoic (C) N.D. N.D. N.D. N.D. +2.7
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