Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS11605 and ABZR87_RS11610 are separated by 172 nucleotidesABZR87_RS11610 and ABZR87_RS11615 are separated by 84 nucleotidesABZR87_RS11615 and ABZR87_RS11620 are separated by 218 nucleotidesABZR87_RS11620 and ABZR87_RS11625 are separated by 73 nucleotides ABZR87_RS11605: ABZR87_RS11605 - NCS1 family nucleobase:cation symporter-1, at 2,459,474 to 2,460,964 _RS11605 ABZR87_RS11610: ABZR87_RS11610 - universal stress protein, at 2,461,137 to 2,461,571 _RS11610 ABZR87_RS11615: ABZR87_RS11615 - LysR family transcriptional regulator, at 2,461,656 to 2,462,585 _RS11615 ABZR87_RS11620: ABZR87_RS11620 - haloacid dehalogenase type II, at 2,462,804 to 2,463,502 _RS11620 ABZR87_RS11625: ABZR87_RS11625 - malate synthase A, at 2,463,576 to 2,465,156 _RS11625
Group Condition ABZR87_RS11605 ABZR87_RS11610 ABZR87_RS11615 ABZR87_RS11620 ABZR87_RS11625
carbon source Lauric (C) +0.0 -0.1 -2.1 -0.8 -6.4
carbon source Sebacic (C) -0.3 -1.0 -0.8 -0.6 -4.2
carbon source Azelaic (C) -0.0 +0.0 -0.8 -0.6 -5.3
carbon source Pimelic (C) +0.0 -0.1 -0.8 -0.9 -5.0
carbon source Beta-alanine (C) -0.0 +0.2 -1.7 -0.5 -4.5
carbon source Octanoic (C) -0.2 -0.0 -0.7 -0.7 -4.8
carbon source Octanoic (C) +0.1 +0.0 -0.1 -1.1 -5.1
carbon source Hexanoic (C) +0.1 -0.0 -0.7 -1.0 -4.3
carbon source Beta-alanine (C) -0.0 -0.1 -0.7 -0.4 -4.5
carbon source butyrate (C) +0.1 +0.1 -0.5 -0.5 -4.9
carbon source Dodecandioic (C) -0.1 -0.3 -0.4 -0.2 -4.6
carbon source Dodecandioic (C) -0.0 +0.2 -0.3 -0.7 -4.4
carbon source butyrate (C) -0.2 +0.3 -0.5 -0.5 -4.1
carbon source Pimelic (C) +0.1 -0.1 -0.3 -0.5 -3.9
carbon source Lauric (C) -0.0 +0.2 -1.4 -0.4 -3.1
carbon source Hexanoic (C) -0.1 -0.1 -0.2 -0.5 -3.7
carbon source acetate (C) +0.0 +0.2 -1.2 -0.4 -2.8
carbon source Pimelic (C) -0.1 +0.1 -0.3 -0.6 -3.3
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.0 -0.3 -1.4 -0.2 -2.1
carbon source acetate (C) +0.1 -0.1 -0.5 -0.5 -3.0
carbon source Sebacic (C) +0.0 +0.2 +0.3 -0.5 -3.8
carbon source Lauric (C) -0.1 +0.1 -0.6 -0.2 -2.9
soil soil sample 5; outgrowth in LB +0.1 -0.1 -1.2 -0.3 -2.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.3 -0.2 -0.6 -2.3
carbon source Pimelic (C) +0.0 +0.3 -0.3 -0.5 -2.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.4 -0.6 -0.5 -2.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -0.9 -1.1 +0.2 -1.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 +0.5 -0.5 -0.2 -1.7
carbon source Heptanoic (C) -0.1 +0.2 +0.7 -0.2 -2.5
root root sample 6; outgrowth in LB +0.4 +0.1 +1.7 -0.5 -0.9
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