Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS11530 and ABZR87_RS11535 are separated by 7 nucleotidesABZR87_RS11535 and ABZR87_RS11540 are separated by 117 nucleotidesABZR87_RS11540 and ABZR87_RS11545 are separated by 1 nucleotidesABZR87_RS11545 and ABZR87_RS11550 overlap by 4 nucleotides ABZR87_RS11530: ABZR87_RS11530 - EAL domain-containing protein, at 2,445,136 to 2,446,020 _RS11530 ABZR87_RS11535: ABZR87_RS11535 - alpha/beta hydrolase, at 2,446,028 to 2,446,702 _RS11535 ABZR87_RS11540: ABZR87_RS11540 - sulfate ABC transporter permease subunit CysT, at 2,446,820 to 2,447,734 _RS11540 ABZR87_RS11545: ABZR87_RS11545 - sulfate ABC transporter permease subunit CysW, at 2,447,736 to 2,448,716 _RS11545 ABZR87_RS11550: ABZR87_RS11550 - sulfate ABC transporter ATP-binding protein, at 2,448,713 to 2,449,822 _RS11550
Group Condition ABZR87_RS11530 ABZR87_RS11535 ABZR87_RS11540 ABZR87_RS11545 ABZR87_RS11550
micoeukaryotes C.elegans, mixed culture-1 -0.0 -0.7 -0.1 -0.4 -0.2
root root EcoFAB sample 2; outgrowth in LB -0.4 -1.0 +0.2 -0.0 +0.0
micoeukaryotes Dictyostellum sp.mixed culture-2 -0.2 -0.8 -0.0 -0.3 +0.2
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 +0.2 -0.8 -0.0 -0.3
root root sample 6; outgrowth in LB -0.7 +0.0 -0.3 -0.5 +0.6
micoeukaryotes C.elegans, mixed culture-2 -0.3 -0.7 +0.3 -0.2 +0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.2 +0.2 +0.3 -0.8 -0.0
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB +0.6 -0.5 -0.3 +0.0 -0.2
carbon source D-Xylose (C) -0.1 -0.4 +0.2 +0.2 -0.3
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.0 +0.5 -0.4 -0.2 -0.3
carbon source Octanoic (C) -0.3 -0.5 +0.6 +0.4 -0.7
carbon source Heptanoic (C) -0.1 +0.5 -0.1 -0.4 -0.3
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -0.3 -0.1 +1.0 -0.4
phage Ra1_0.1 -0.5 +0.5 +0.0 -0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 +0.1 -0.6 +0.2 -0.5
carbon source Azelaic (C) -0.4 -0.5 +0.3 +0.2 +0.2
carbon source Protocatechuic Acid (C) +0.1 -0.3 +0.6 -0.1 -0.5
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 +0.3 -0.4 +0.1 -0.2
carbon source butyrate (C) +0.1 +0.6 +0.5 +0.2 -0.9
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB +0.3 +0.7 -0.5 +0.4 -0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -0.8 +0.8 +0.2 +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.4 -0.2 +0.1 +0.5 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.5 +0.1 -0.2 +0.6
rhizosphere rhizosphere sample 6; outgrowth in LB +0.3 +0.5 +0.1 -0.0 +0.4
soil soil sample 1; outgrowth in LB -0.0 +0.4 +0.5 -0.1 +0.5
root root sample 5; outgrowth in LB +0.3 -0.5 +0.7 +0.3 +0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.2 +0.4 -0.2 +0.5 +0.9
rhizosphere rhizosphere sample 3; outgrowth in LB -0.0 +0.9 +0.1 +0.2 +0.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.0 +0.2 +1.0 +0.3 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 +1.4 -0.2 +0.1 +1.6
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ABZR87_RS11530
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ABZR87_RS11535
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ABZR87_RS11545
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ABZR87_RS11550
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