Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

Group	Condition	ABZR87_RS11465	ABZR87_RS11470	ABZR87_RS11475	ABZR87_RS11480	ABZR87_RS11485
nitrogen source	nitrogen source nitrate 20mM	N.D.	-4.5	N.D.	+0.1	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-3.4	N.D.	+0.1	-0.9
nitrogen source	nitrogen source nitrate 20mM	N.D.	-3.8	N.D.	+0.2	+0.0
nitrogen source	nitrogen source nitrate 5mM	N.D.	-3.6	N.D.	+0.1	+0.1
nitrogen source	nitrogen source nitrate 5mM	N.D.	-3.4	N.D.	+0.1	+0.1
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-2.6	N.D.	+0.2	-0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-2.0	N.D.	-0.2	-0.0
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	N.D.	-2.1	N.D.	-0.3	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-1.8	N.D.	+0.0	-0.4
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	N.D.	-2.2	N.D.	-0.1	+0.3
root	root EcoFAB sample 1; outgrowth in LB	N.D.	-1.5	N.D.	-0.2	+0.1
soil	soil EcoFAB sample 2; outgrowth in LB	N.D.	-1.9	N.D.	-0.1	+0.4
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	N.D.	-1.3	N.D.	-0.2	-0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-1.1	N.D.	+0.0	-0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-1.5	N.D.	+0.1	-0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	N.D.	-1.7	N.D.	+0.0	+0.3
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	N.D.	-1.4	N.D.	+0.1	-0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	N.D.	-1.4	N.D.	-0.1	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-1.1	N.D.	+0.1	-0.1
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	N.D.	-1.0	N.D.	+0.1	-0.2
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	N.D.	+0.1	N.D.	+0.1	-1.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-0.7	N.D.	+0.3	-0.5
rhizosphere	rhizosphere sample 9; outgrowth in LB	N.D.	-1.2	N.D.	-0.0	+0.3
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-1.2	N.D.	+0.1	+0.2
soil	soil EcoFAB sample 1; outgrowth in LB	N.D.	-1.2	N.D.	+0.1	+0.3
rhizosphere	rhizosphere sample 5; outgrowth in LB	N.D.	-1.1	N.D.	+0.0	+0.4
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	N.D.	-0.9	N.D.	-0.1	+0.4
root	root EcoFAB sample 2; outgrowth in LB	N.D.	-1.1	N.D.	-0.0	+0.6
rhizosphere	rhizosphere sample 4; outgrowth in LB	N.D.	-0.8	N.D.	+0.1	+0.3
rhizosphere	rhizosphere sample 7; outgrowth in LB	N.D.	-0.9	N.D.	+0.2	+0.5