Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS11460 and ABZR87_RS11465 are separated by 12 nucleotidesABZR87_RS11465 and ABZR87_RS11470 are separated by 16 nucleotidesABZR87_RS11470 and ABZR87_RS11475 are separated by 15 nucleotidesABZR87_RS11475 and ABZR87_RS11480 are separated by 159 nucleotides ABZR87_RS11460: ABZR87_RS11460 - gephyrin-like molybdotransferase Glp, at 2,429,260 to 2,430,519 _RS11460 ABZR87_RS11465: ABZR87_RS11465 - molybdopterin converting factor subunit 1, at 2,430,532 to 2,430,789 _RS11465 ABZR87_RS11470: ABZR87_RS11470 - molybdenum cofactor biosynthesis protein MoaE, at 2,430,806 to 2,431,327 _RS11470 ABZR87_RS11475: ABZR87_RS11475 - fluoride efflux transporter CrcB, at 2,431,343 to 2,431,723 _RS11475 ABZR87_RS11480: ABZR87_RS11480 - 3-hydroxybutyrate oligomer hydrolase family protein, at 2,431,883 to 2,434,060 _RS11480
Group Condition ABZR87_RS11460 ABZR87_RS11465 ABZR87_RS11470 ABZR87_RS11475 ABZR87_RS11480
nitrogen source nitrogen source nitrate 20mM -6.7 N.D. -3.8 N.D. +0.2
nitrogen source nitrogen source nitrate 20mM -4.7 N.D. -4.5 N.D. +0.1
nitrogen source nitrogen source nitrate 5mM -3.4 N.D. -3.6 N.D. +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.7 N.D. -3.4 N.D. +0.1
nitrogen source nitrogen source nitrate 5mM -1.3 N.D. -3.4 N.D. +0.1
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -2.0 N.D. -2.1 N.D. -0.3
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.8 N.D. -2.6 N.D. +0.2
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -1.8 N.D. -2.2 N.D. -0.1
no_plant_soil no_plant_soil sample 3; outgrowth in LB -1.6 N.D. -1.4 N.D. +0.1
soil soil EcoFAB sample 2; outgrowth in LB -0.8 N.D. -1.9 N.D. -0.1
root root EcoFAB sample 2; outgrowth in LB -1.6 N.D. -1.1 N.D. -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -2.3 N.D. -0.7 N.D. +0.3
no_plant_soil no_plant_soil sample 2; outgrowth in LB -1.2 N.D. -1.3 N.D. -0.2
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -0.9 N.D. -1.7 N.D. +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 N.D. -2.0 N.D. -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.8 N.D. -1.5 N.D. +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 N.D. -1.2 N.D. +0.1
root root sample 5; outgrowth in LB -1.7 N.D. -0.5 N.D. +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 N.D. -1.8 N.D. +0.0
root root EcoFAB sample 1; outgrowth in LB -0.2 N.D. -1.5 N.D. -0.2
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB -0.4 N.D. -1.4 N.D. -0.1
rhizosphere rhizosphere sample 5; outgrowth in LB -0.8 N.D. -1.1 N.D. +0.0
carbon source Octanoic (C) -1.1 N.D. -0.5 N.D. -0.1
carbon source Heptanoic (C) -1.2 N.D. -0.5 N.D. +0.1
rhizosphere rhizosphere sample 1; outgrowth in LB -1.3 N.D. -0.2 N.D. -0.2
carbon source Heptanoic (C) -1.1 N.D. -0.5 N.D. +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 N.D. -1.1 N.D. +0.1
soil soil sample 4; outgrowth in LB -1.0 N.D. -0.6 N.D. +0.2
soil soil EcoFAB sample 1; outgrowth in LB -0.3 N.D. -1.2 N.D. +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.9 N.D. -1.1 N.D. +0.0
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