Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS11420 and ABZR87_RS11425 are separated by 40 nucleotidesABZR87_RS11425 and ABZR87_RS11430 are separated by 126 nucleotidesABZR87_RS11430 and ABZR87_RS11435 are separated by 4 nucleotidesABZR87_RS11435 and ABZR87_RS11440 are separated by 296 nucleotides ABZR87_RS11420: ABZR87_RS11420 - DegT/DnrJ/EryC1/StrS aminotransferase family protein, at 2,420,382 to 2,421,542 _RS11420 ABZR87_RS11425: ABZR87_RS11425 - SMR family transporter, at 2,421,583 to 2,421,954 _RS11425 ABZR87_RS11430: ABZR87_RS11430 - glycosyltransferase family 39 protein, at 2,422,081 to 2,423,751 _RS11430 ABZR87_RS11435: ABZR87_RS11435 - Mth938-like domain-containing protein, at 2,423,756 to 2,424,136 _RS11435 ABZR87_RS11440: ABZR87_RS11440 - pyridoxal phosphate-dependent aminotransferase, at 2,424,433 to 2,425,674 _RS11440
Group Condition ABZR87_RS11420 ABZR87_RS11425 ABZR87_RS11430 ABZR87_RS11435 ABZR87_RS11440
soil soil sample 5; outgrowth in LB -2.2 N.D. N.D. -2.6 -3.0
carbon source Heptanoic (C) +2.9 N.D. N.D. -4.4 -5.0
carbon source Trans-2-methyl-2-butenoic (C) -0.7 N.D. N.D. -1.5 -4.0
carbon source Heptanoic (C) +3.0 N.D. N.D. -3.5 -5.5
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -0.1 N.D. N.D. -3.2 -2.6
carbon source Protocatechuic Acid (C) -0.9 N.D. N.D. -0.8 -4.1
carbon source propionate (C) -0.6 N.D. N.D. -1.2 -3.9
carbon source Protocatechuic Acid (C) -0.7 N.D. N.D. -0.2 -4.6
carbon source Trans-2-methyl-2-butenoic (C) +0.8 N.D. N.D. -2.1 -4.3
carbon source propionate (C) +0.1 N.D. N.D. -1.8 -3.7
carbon source Hexanoic (C) +0.5 N.D. N.D. -1.4 -4.5
carbon source Carbon source D-Glucose 10 mM +0.0 N.D. N.D. -1.5 -3.9
carbon source Protocatechuic Acid (C) -0.2 N.D. N.D. -0.8 -4.3
carbon source Hexanoic (C) +0.2 N.D. N.D. -1.1 -4.4
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) +0.3 N.D. N.D. -2.0 -3.4
nitrogen source nitrogen source Ammonium chloride 20mM +0.4 N.D. N.D. -0.8 -4.6
carbon source D-Glucose (C) +0.5 N.D. N.D. -0.6 -4.4
carbon source D-Galactose (C) +0.6 N.D. N.D. -1.0 -3.8
carbon source butyrate (C) +0.5 N.D. N.D. +0.1 -4.9
carbon source D-Glucose (C) +0.7 N.D. N.D. -1.5 -3.3
carbon source Carbon source D-Glucose 10 mM +0.7 N.D. N.D. -1.0 -3.8
nitrogen source nitrogen source Ammonium chloride 20mM +0.8 N.D. N.D. +0.1 -4.5
carbon source Sebacic (C) +1.7 N.D. N.D. -1.3 -3.9
carbon source Sebacic (C) +0.8 N.D. N.D. +0.7 -3.8
carbon source Octanoic (C) +6.3 N.D. N.D. -4.0 -4.6
carbon source Dodecandioic (C) +2.4 N.D. N.D. -0.2 -4.0
carbon source Lauric (C) +3.8 N.D. N.D. -0.3 -5.0
carbon source 4-Hydroxybenzoic Acid (C) +1.0 N.D. N.D. +1.0 -3.5
carbon source Dodecandioic (C) +2.3 N.D. N.D. +0.4 -4.0
carbon source Octanoic (C) +7.0 N.D. N.D. -3.5 -4.6
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