Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS11325 and ABZR87_RS11330 are separated by 120 nucleotidesABZR87_RS11330 and ABZR87_RS11335 are separated by 253 nucleotidesABZR87_RS11335 and ABZR87_RS11340 are separated by 137 nucleotidesABZR87_RS11340 and ABZR87_RS11345 are separated by 93 nucleotides ABZR87_RS11325: ABZR87_RS11325 - hypothetical protein, at 2,404,135 to 2,404,320 _RS11325 ABZR87_RS11330: ABZR87_RS11330 - transcriptional repressor LexA, at 2,404,441 to 2,405,091 _RS11330 ABZR87_RS11335: ABZR87_RS11335 - ferredoxin--NADP reductase, at 2,405,345 to 2,406,121 _RS11335 ABZR87_RS11340: ABZR87_RS11340 - asparaginase, at 2,406,259 to 2,407,251 _RS11340 ABZR87_RS11345: ABZR87_RS11345 - 30S ribosomal protein S6, at 2,407,345 to 2,407,713 _RS11345
Group Condition ABZR87_RS11325 ABZR87_RS11330 ABZR87_RS11335 ABZR87_RS11340 ABZR87_RS11345
root root sample 5; outgrowth in LB -0.7 -5.0 N.D. -1.2 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB -0.2 -3.9 N.D. -0.5 N.D.
rhizosphere rhizosphere sample 8; outgrowth in LB -0.1 -3.3 N.D. -0.6 N.D.
rhizosphere rhizosphere sample 9; outgrowth in LB +0.2 -3.5 N.D. -0.7 N.D.
rhizosphere rhizosphere sample 1; outgrowth in LB -0.6 -1.8 N.D. -1.4 N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB -0.2 -2.6 N.D. -0.8 N.D.
soil soil sample 7; outgrowth in LB +0.2 -3.4 N.D. -0.1 N.D.
root root sample 6; outgrowth in LB +0.7 -3.3 N.D. -0.6 N.D.
carbon source Azelaic (C) -1.9 -0.5 N.D. -0.5 N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB -0.5 -1.7 N.D. -0.6 N.D.
soil soil sample 3; outgrowth in LB -0.2 -2.1 N.D. -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.1 -1.7 N.D. -0.8 N.D.
soil soil sample 8; outgrowth in LB +0.2 -2.6 N.D. -0.2 N.D.
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB -0.3 -1.1 N.D. -1.2 N.D.
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -0.2 -1.9 N.D. -0.4 N.D.
soil soil sample 2; outgrowth in LB +0.5 -2.6 N.D. -0.3 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 -1.0 N.D. -0.4 N.D.
root root sample 4; outgrowth in LB +0.1 -1.8 N.D. -0.7 N.D.
soil soil sample 4; outgrowth in LB +0.5 -2.2 N.D. -0.6 N.D.
soil soil sample 1; outgrowth in LB +0.1 -1.9 N.D. -0.6 N.D.
root root EcoFAB sample 1; outgrowth in LB +0.6 -2.0 N.D. -0.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -2.5 -0.3 N.D. +0.7 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.3 -1.9 N.D. -0.3 N.D.
soil soil EcoFAB sample 1; outgrowth in LB +0.9 -0.7 N.D. -1.9 N.D.
carbon source Octanoic (C) +0.6 -2.1 N.D. -0.0 N.D.
rhizosphere rhizosphere sample 4; outgrowth in LB +0.8 -1.7 N.D. -0.5 N.D.
carbon source Octanoic (C) +0.8 -2.6 N.D. +0.4 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB +0.5 -1.1 N.D. -0.8 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +1.1 -0.7 N.D. -1.5 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 +2.2 N.D. +0.1 N.D.
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ABZR87_RS11325
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ABZR87_RS11330
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ABZR87_RS11340
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ABZR87_RS11345
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