Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS11125	ABZR87_RS11130	ABZR87_RS11135	ABZR87_RS11140	ABZR87_RS11145
no_plant_soil	no_plant_soil sample 3; outgrowth in LB	-2.1	+0.1	-0.1	-6.0	+0.1
rhizosphere	rhizosphere sample 3; outgrowth in LB	-0.3	-0.1	-0.7	-3.3	-1.3
in planta	Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish)	-1.4	+0.0	-1.3	-1.3	-1.4
soil	soil sample 9; outgrowth in LB	-1.0	+0.0	-0.9	-2.2	-1.1
rhizosphere	rhizosphere sample 5; outgrowth in LB	-0.8	+0.0	-0.8	-2.5	-0.7
no_plant_soil	no_plant_soil sample 1; outgrowth in LB	-1.5	+0.0	-1.2	-0.5	-1.5
carbon source	4-Hydroxybenzoic Acid (C)	-2.9	+0.0	+0.2	-1.7	+0.0
rhizosphere	rhizosphere sample 4; outgrowth in LB	-2.3	+0.2	-0.8	-0.3	-0.6
carbon source	Octanoic (C)	-3.0	+0.3	+0.0	-0.9	-0.2
rhizosphere	rhizosphere sample 7; outgrowth in LB	-1.5	+0.1	-0.6	-0.9	-0.8
carbon source	Trans-2-methyl-2-butenoic (C)	-3.6	+0.1	-0.0	-0.2	+0.1
carbon source	Octanoic (C)	-3.3	-0.2	+0.3	-0.3	-0.1
rhizosphere	rhizosphere sample 6; outgrowth in LB	-1.2	+0.3	-0.7	-1.4	-0.5
soil	soil sample 3; outgrowth in LB	-1.1	-0.3	-0.5	-1.3	-0.3
carbon source	Heptanoic (C)	-3.6	+0.1	+0.1	-0.3	+0.2
carbon source	succinate (C)	-3.8	+0.1	+0.1	+0.2	-0.1
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	-2.4	+0.1	-0.6	-0.2	-0.4
carbon source	Valeric (C)	-3.1	+0.3	+0.2	-0.5	-0.0
carbon source	Heptanoic (C)	-3.2	-0.0	+0.1	+0.0	+0.1
rhizosphere	rhizosphere sample 8; outgrowth in LB	-2.0	+0.1	-0.6	+0.3	-0.7
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.9	-0.0	-1.1	+0.8	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-1.0	+0.3	-0.4	-1.4	-0.3
carbon source	Sebacic (C)	-2.2	-0.5	-0.0	-0.4	+0.4
carbon source	succinate (C)	-2.8	+0.0	+0.1	+0.5	+0.0
carbon source	propionate (C)	-2.5	+0.0	+0.2	+0.6	+0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-2.5	+0.3	-0.1	+1.0	-0.1
soil	soil EcoFAB sample 1; outgrowth in LB	-2.3	+0.4	+0.6	+0.8	+0.8
root	root EcoFAB sample 2; outgrowth in LB	-1.2	-0.1	-0.5	+3.2	-0.3
carbon source	Disodium Glutarate (C)	+7.9	-0.1	-0.1	+0.4	+0.0
carbon source	Disodium Glutarate (C)	+8.2	+0.2	+0.0	+0.8	+0.0