Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS11050 and ABZR87_RS11055 are separated by 454 nucleotidesABZR87_RS11055 and ABZR87_RS11060 are separated by 158 nucleotidesABZR87_RS11060 and ABZR87_RS11065 are separated by 7 nucleotidesABZR87_RS11065 and ABZR87_RS11070 are separated by 67 nucleotides ABZR87_RS11050: ABZR87_RS11050 - rhodanese-like domain-containing protein, at 2,342,377 to 2,342,853 _RS11050 ABZR87_RS11055: ABZR87_RS11055 - 3-hydroxylaminophenol mutase, at 2,343,308 to 2,344,723 _RS11055 ABZR87_RS11060: ABZR87_RS11060 - hypothetical protein, at 2,344,882 to 2,345,406 _RS11060 ABZR87_RS11065: ABZR87_RS11065 - nitrogen regulation protein NR(II), at 2,345,414 to 2,346,616 _RS11065 ABZR87_RS11070: ABZR87_RS11070 - nitrogen regulation protein NR(I), at 2,346,684 to 2,348,192 _RS11070
Group Condition ABZR87_RS11050 ABZR87_RS11055 ABZR87_RS11060 ABZR87_RS11065 ABZR87_RS11070
nitrogen source nitrogen source nitrate 20mM -0.4 N.D. -0.3 -6.6 -7.0
nitrogen source nitrogen source nitrate 5mM +0.0 N.D. -0.2 -6.2 -6.7
nitrogen source nitrogen source nitrate 20mM -0.6 N.D. -1.2 -5.0 -6.3
nitrogen source nitrogen source nitrate 5mM +0.0 N.D. -0.5 -5.8 -5.2
nitrogen source nitrogen source nitrite 5mM -0.6 N.D. -0.4 -4.3 -3.5
nitrogen source nitrogen source nitrite 5mM -0.5 N.D. -0.5 -2.3 -4.2
nitrogen source nitrogen source nitrite 1mM -0.3 N.D. -0.5 -3.7 -3.1
nitrogen source nitrogen source nitrite 0.5mM -0.7 N.D. -0.1 -2.0 -2.6
carbon source Protocatechuic Acid (C) +0.0 N.D. -0.1 -2.6 -2.7
carbon source Dodecandioic (C) -0.6 N.D. -0.1 -2.4 -1.7
carbon source Octanoic (C) -2.7 N.D. -0.6 -0.7 -0.5
nitrogen source nitrogen source nitrite 0.5mM -0.2 N.D. +0.1 -1.9 -2.2
carbon source Azelaic (C) -0.5 N.D. -0.9 -1.5 -1.2
carbon source Beta-alanine (C) -0.5 N.D. +0.0 -1.9 -1.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.2 N.D. -1.3 -1.5 -1.0
nitrogen source nitrogen source Ammonium chloride 20mM -0.5 N.D. +0.1 -1.7 -1.7
carbon source Dodecandioic (C) -0.0 N.D. +0.3 -2.5 -1.6
carbon source D-Glucose (C) -0.5 N.D. -0.4 -1.8 -0.9
carbon source Protocatechuic Acid (C) +0.1 N.D. +0.1 -2.1 -1.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 N.D. -0.8 -1.1 -1.2
carbon source Protocatechuic Acid (C) +0.1 N.D. -0.1 -1.9 -1.6
in planta Plant=None; PlantTreatment=None; Sample=no_plant_control; GrowthSubstrate=agar_0.75vol%; Collection=direct (sample tracking unclear; do not publish) -0.5 N.D. -0.5 -1.6 -0.9
nitrogen source nitrogen source Ammonium chloride 20mM -0.4 N.D. +0.1 -1.9 -1.2
carbon source Sebacic (C) +0.0 N.D. +0.4 -2.1 -1.7
carbon source Beta-alanine (C) -0.2 N.D. -0.2 -1.9 -1.1
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -1.0 N.D. +0.1 -1.8 -0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.2 N.D. -0.7 -1.4 -1.2
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +1.3 N.D. -0.8 -1.2 -0.4
phage Ra1_0.1 -0.1 N.D. +6.3 +0.6 -0.2
phage Ra3_1 +0.1 N.D. +6.1 +0.7 -0.1
remove
ABZR87_RS11050
plot		 remove
ABZR87_RS11055
plot		 remove
ABZR87_RS11060		 remove
ABZR87_RS11065
plot		 remove
ABZR87_RS11070
plot