Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS10940 and ABZR87_RS10945 are separated by 73 nucleotidesABZR87_RS10945 and ABZR87_RS10950 are separated by 55 nucleotidesABZR87_RS10950 and ABZR87_RS10955 are separated by 12 nucleotidesABZR87_RS10955 and ABZR87_RS10960 are separated by 76 nucleotides ABZR87_RS10940: ABZR87_RS10940 - RNA chaperone Hfq, at 2,317,618 to 2,317,857 _RS10940 ABZR87_RS10945: ABZR87_RS10945 - GTPase HflX, at 2,317,931 to 2,319,184 _RS10945 ABZR87_RS10950: ABZR87_RS10950 - FtsH protease activity modulator HflK, at 2,319,240 to 2,320,616 _RS10950 ABZR87_RS10955: ABZR87_RS10955 - protease modulator HflC, at 2,320,629 to 2,321,543 _RS10955 ABZR87_RS10960: ABZR87_RS10960 - DUF2065 domain-containing protein, at 2,321,620 to 2,321,820 _RS10960
Group Condition ABZR87_RS10940 ABZR87_RS10945 ABZR87_RS10950 ABZR87_RS10955 ABZR87_RS10960
root root sample 5; outgrowth in LB N.D. -0.4 -1.3 -1.9 N.D.
rhizosphere rhizosphere sample 2; outgrowth in LB N.D. -0.2 -1.4 -1.4 N.D.
rhizosphere rhizosphere sample 7; outgrowth in LB N.D. +0.0 -0.9 -1.2 N.D.
rhizosphere rhizosphere sample 6; outgrowth in LB N.D. -0.3 -1.0 -0.9 N.D.
root root sample 6; outgrowth in LB N.D. +0.4 -1.4 -1.0 N.D.
carbon source adipate (C) N.D. +0.0 -1.0 -1.0 N.D.
carbon source Pimelic (C) N.D. -0.2 -0.9 -0.9 N.D.
rhizosphere rhizosphere sample 5; outgrowth in LB N.D. -0.0 -0.9 -0.8 N.D.
carbon source adipate (C) N.D. +0.0 -0.9 -0.8 N.D.
root root sample 4; outgrowth in LB N.D. +0.1 -0.9 -0.8 N.D.
soil soil sample 6; outgrowth in LB N.D. -0.0 -0.8 -0.7 N.D.
soil soil sample 3; outgrowth in LB N.D. -0.6 -0.5 -0.4 N.D.
root root EcoFAB sample 1; outgrowth in LB N.D. +0.4 -0.9 -0.5 N.D.
phage Ra1_0.1 N.D. -1.1 -0.3 +0.5 N.D.
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. +0.5 -0.6 -0.5 N.D.
phage Ra3_1 N.D. -0.7 -0.2 +0.7 N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 N.D. -0.2 +1.1 -0.4 N.D.
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.5 +0.7 +1.0 N.D.
carbon source D-Galactose (C) N.D. +0.1 +0.6 +0.8 N.D.
carbon source Azelaic (C) N.D. -0.0 +0.4 +1.3 N.D.
carbon source Heptanoic (C) N.D. -0.4 +1.4 +0.8 N.D.
carbon source D-Galactose (C) N.D. +0.3 +0.6 +0.8 N.D.
carbon source Heptanoic (C) N.D. -0.3 +1.4 +0.8 N.D.
carbon source Lauric (C) N.D. +0.2 +0.4 +1.4 N.D.
carbon source Sebacic (C) N.D. -0.1 +1.0 +1.2 N.D.
carbon source Sebacic (C) N.D. -0.3 +1.2 +2.4 N.D.
carbon source Dodecandioic (C) N.D. -0.1 +2.6 +3.1 N.D.
carbon source Dodecandioic (C) N.D. -0.0 +2.9 +3.3 N.D.
carbon source Octanoic (C) N.D. -0.2 +5.0 +5.5 N.D.
carbon source Octanoic (C) N.D. -0.6 +5.8 +5.9 N.D.
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ABZR87_RS10940
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ABZR87_RS10945
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ABZR87_RS10955
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