Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS10820 and ABZR87_RS10825 are separated by 22 nucleotidesABZR87_RS10825 and ABZR87_RS10830 are separated by 89 nucleotidesABZR87_RS10830 and ABZR87_RS10835 are separated by 64 nucleotidesABZR87_RS10835 and ABZR87_RS10840 are separated by 23 nucleotides ABZR87_RS10820: ABZR87_RS10820 - LysR substrate-binding domain-containing protein, at 2,292,167 to 2,293,081 _RS10820 ABZR87_RS10825: ABZR87_RS10825 - CaiB/BaiF CoA-transferase family protein, at 2,293,104 to 2,294,312 _RS10825 ABZR87_RS10830: ABZR87_RS10830 - ABC transporter substrate-binding protein, at 2,294,402 to 2,295,451 _RS10830 ABZR87_RS10835: ABZR87_RS10835 - ABC transporter ATP-binding protein, at 2,295,516 to 2,296,328 _RS10835 ABZR87_RS10840: ABZR87_RS10840 - ABC transporter permease, at 2,296,352 to 2,297,143 _RS10840
Group Condition ABZR87_RS10820 ABZR87_RS10825 ABZR87_RS10830 ABZR87_RS10835 ABZR87_RS10840
carbon source Lauric (C) -6.2 +0.2 +0.1 +0.1 +0.3
carbon source Azelaic (C) -4.9 -0.0 -0.5 -0.3 +0.5
carbon source Octanoic (C) -4.5 +0.3 +0.1 -1.3 +0.4
carbon source Sebacic (C) -3.8 +0.4 +0.1 -0.4 -0.1
carbon source Octanoic (C) -3.7 +0.7 +0.1 -0.5 +0.1
carbon source 1,2-Propanediol (C) -2.8 -0.0 -0.1 -0.2 +0.1
carbon source 3-Hydroxypropionate (C) -3.2 +0.1 -0.2 +0.3 +0.1
carbon source Dodecandioic (C) -3.4 +0.3 -0.1 +0.5 +0.0
carbon source Protocatechuic Acid (C) -2.8 -0.1 +0.0 +0.2 +0.1
carbon source Protocatechuic Acid (C) -2.4 -0.1 -0.1 -0.0 -0.0
carbon source succinate (C) -2.6 -0.0 +0.0 +0.0 +0.1
soil soil EcoFAB sample 1; outgrowth in LB -0.7 -0.2 +0.2 -1.6 -0.0
carbon source Dodecandioic (C) -3.1 +0.0 +0.1 +0.4 +0.3
carbon source Protocatechuic Acid (C) -2.1 -0.0 -0.1 +0.2 +0.1
carbon source Sebacic (C) -2.2 +0.2 -0.0 -0.1 +0.2
carbon source D-Glucose (C) -1.6 -0.2 -0.2 -0.0 -0.0
carbon source succinate (C) -2.2 +0.0 -0.0 +0.2 +0.2
carbon source D-Glucose (C) -1.9 -0.1 +0.1 +0.1 -0.0
nitrogen source nitrogen source Ammonium chloride 20mM -1.8 +0.0 -0.1 +0.0 +0.0
carbon source 4-Hydroxybenzoic Acid (C) -2.5 +0.3 -0.1 +0.4 +0.0
carbon source D-Glucose (C) -1.8 -0.0 +0.1 -0.0 +0.1
carbon source D-Galactose (C) -1.7 -0.1 +0.0 +0.1 -0.0
carbon source D-Galactose (C) -1.9 -0.0 -0.1 +0.5 -0.0
nitrogen source nitrogen source Ammonium chloride 20mM -1.6 +0.2 -0.1 +0.0 -0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.3 -0.3 -0.9 +0.2
carbon source Carbon source D-Glucose 10 mM -1.7 +0.1 -0.0 +0.5 -0.1
carbon source acetate (C) -1.6 +0.1 -0.0 +0.1 +0.1
nitrogen source nitrogen source nitrate 5mM -1.0 +0.4 -0.1 -0.7 +0.2
carbon source D-Glucose (C) -1.7 +0.3 +0.1 +0.0 +0.1
carbon source Carbon source D-Glucose 10 mM -1.6 +0.1 -0.0 +0.7 +0.1
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ABZR87_RS10820
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ABZR87_RS10825
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ABZR87_RS10835
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ABZR87_RS10840
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