Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS10685 and ABZR87_RS10690 are separated by 14 nucleotidesABZR87_RS10690 and ABZR87_RS10695 overlap by 4 nucleotidesABZR87_RS10695 and ABZR87_RS10700 are separated by 241 nucleotidesABZR87_RS10700 and ABZR87_RS10705 are separated by 83 nucleotides ABZR87_RS10685: ABZR87_RS10685 - microcin C ABC transporter permease YejB, at 2,261,657 to 2,262,709 _RS10685 ABZR87_RS10690: ABZR87_RS10690 - ABC transporter permease, at 2,262,724 to 2,263,848 _RS10690 ABZR87_RS10695: ABZR87_RS10695 - ABC transporter ATP-binding protein, at 2,263,845 to 2,265,500 _RS10695 ABZR87_RS10700: ABZR87_RS10700 - C40 family peptidase, at 2,265,742 to 2,266,389 _RS10700 ABZR87_RS10705: ABZR87_RS10705 - patatin-like phospholipase family protein, at 2,266,473 to 2,267,429 _RS10705
Group Condition ABZR87_RS10685 ABZR87_RS10690 ABZR87_RS10695 ABZR87_RS10700 ABZR87_RS10705
carbon source Lauric (C) -0.5 -0.6 -0.3 -6.3 +0.0
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -1.5 -1.8 -1.4 -0.5 -0.4
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB -1.7 -1.1 -1.2 -1.3 +0.2
soil soil EcoFAB sample 1; outgrowth in LB -0.7 -1.7 -1.9 -0.8 +0.3
root root sample 6; outgrowth in LB -0.6 -0.9 -1.3 -1.5 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 -1.0 -0.8 -1.5 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.0 -1.2 -0.6 -1.4 +0.4
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB -1.0 -0.8 -1.1 -1.0 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 -0.9 -0.8 -1.2 +0.3
root root sample 5; outgrowth in LB -1.0 -1.1 -0.5 -0.9 +0.0
soil soil EcoFAB sample 2; outgrowth in LB -1.0 -0.6 -1.1 -0.8 +0.1
root root EcoFAB sample 1; outgrowth in LB -1.0 -0.7 -1.1 -0.6 +0.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.1 -0.7 -0.8 -0.9 +0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.9 -0.5 -0.7 -1.1 +0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.7 -1.1 -0.3 -0.9 -0.1
rhizosphere rhizosphere sample 8; outgrowth in LB -0.7 -0.9 -0.3 -1.3 +0.2
root root sample 4; outgrowth in LB -0.6 -0.5 -0.8 -1.1 +0.2
root root EcoFAB sample 2; outgrowth in LB -0.8 -0.5 -0.6 -1.0 +0.4
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.6 -0.7 -0.6 -0.7 +0.4
carbon source Octanoic (C) +1.2 +1.0 +1.2 -3.3 +0.2
carbon source Octanoic (C) +1.2 +1.3 +1.4 -3.2 -0.1
carbon source Protocatechuic Acid (C) +0.6 +0.3 +0.6 +1.2 -0.3
carbon source Sebacic (C) +0.9 +1.1 +1.3 +1.3 +0.2
carbon source Hexanoic (C) +1.9 +1.6 +1.9 +0.2 +0.0
carbon source Hexanoic (C) +1.8 +1.7 +1.9 +0.3 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +2.3 +1.9 +2.5 +2.8 +0.1
carbon source Heptanoic (C) +4.0 +3.8 +4.0 +1.5 -0.0
carbon source Heptanoic (C) +4.3 +4.1 +4.4 +1.4 -0.0
carbon source Dodecandioic (C) +5.0 +4.9 +5.1 +2.0 +0.1
carbon source Dodecandioic (C) +5.0 +5.0 +5.2 +2.0 +0.1
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