Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS10670 and ABZR87_RS10675 are separated by 192 nucleotidesABZR87_RS10675 and ABZR87_RS10680 are separated by 308 nucleotidesABZR87_RS10680 and ABZR87_RS10685 are separated by 16 nucleotidesABZR87_RS10685 and ABZR87_RS10690 are separated by 14 nucleotides ABZR87_RS10670: ABZR87_RS10670 - tRNA-Ser, at 2,258,365 to 2,258,458 _RS10670 ABZR87_RS10675: ABZR87_RS10675 - enoyl-ACP reductase FabI, at 2,258,651 to 2,259,445 _RS10675 ABZR87_RS10680: ABZR87_RS10680 - extracellular solute-binding protein, at 2,259,754 to 2,261,640 _RS10680 ABZR87_RS10685: ABZR87_RS10685 - microcin C ABC transporter permease YejB, at 2,261,657 to 2,262,709 _RS10685 ABZR87_RS10690: ABZR87_RS10690 - ABC transporter permease, at 2,262,724 to 2,263,848 _RS10690
Group Condition ABZR87_RS10670 ABZR87_RS10675 ABZR87_RS10680 ABZR87_RS10685 ABZR87_RS10690
soil soil EcoFAB sample 1; outgrowth in LB N.D. N.D. -1.9 -0.7 -1.7
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. N.D. -0.8 -1.5 -1.8
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB N.D. N.D. -1.2 -1.7 -1.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -0.9 -1.0 -1.2
soil soil EcoFAB sample 2; outgrowth in LB N.D. N.D. -1.2 -1.0 -0.6
root root sample 5; outgrowth in LB N.D. N.D. -0.7 -1.0 -1.1
root root EcoFAB sample 1; outgrowth in LB N.D. N.D. -1.0 -1.0 -0.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -0.9 -1.1 -0.7
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB N.D. N.D. -0.8 -1.0 -0.8
carbon source Trans-2-methyl-2-butenoic (C) N.D. N.D. -0.9 -0.7 -1.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -1.1 -0.5 -1.0
carbon source Trans-2-methyl-2-butenoic (C) N.D. N.D. -0.8 -0.8 -0.9
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB N.D. N.D. -0.8 -0.8 -0.8
root root EcoFAB sample 2; outgrowth in LB N.D. N.D. -1.1 -0.8 -0.5
root root sample 6; outgrowth in LB N.D. N.D. -0.9 -0.6 -0.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -0.9 -0.9 -0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -0.5 -0.9 -0.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -0.3 -0.7 -1.1
rhizosphere rhizosphere sample 8; outgrowth in LB N.D. N.D. -0.4 -0.7 -0.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. -0.7 -0.5 -0.7
carbon source Sebacic (C) N.D. N.D. +1.0 +0.9 +1.1
carbon source Octanoic (C) N.D. N.D. +1.1 +1.2 +1.0
carbon source Octanoic (C) N.D. N.D. +1.4 +1.2 +1.3
carbon source Hexanoic (C) N.D. N.D. +1.7 +1.9 +1.6
carbon source Hexanoic (C) N.D. N.D. +1.8 +1.8 +1.7
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. +2.2 +2.3 +1.9
carbon source Heptanoic (C) N.D. N.D. +3.7 +4.0 +3.8
carbon source Heptanoic (C) N.D. N.D. +4.1 +4.3 +4.1
carbon source Dodecandioic (C) N.D. N.D. +4.8 +5.0 +4.9
carbon source Dodecandioic (C) N.D. N.D. +4.9 +5.0 +5.0
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