Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS10545 and ABZR87_RS10550 are separated by 61 nucleotidesABZR87_RS10550 and ABZR87_RS10555 are separated by 34 nucleotidesABZR87_RS10555 and ABZR87_RS10560 are separated by 152 nucleotidesABZR87_RS10560 and ABZR87_RS10565 are separated by 239 nucleotides ABZR87_RS10545: ABZR87_RS10545 - 4-hydroxy-tetrahydrodipicolinate synthase, at 2,230,791 to 2,231,675 _RS10545 ABZR87_RS10550: ABZR87_RS10550 - outer membrane protein assembly factor BamC, at 2,231,737 to 2,232,933 _RS10550 ABZR87_RS10555: ABZR87_RS10555 - MBL fold metallo-hydrolase, at 2,232,968 to 2,233,753 _RS10555 ABZR87_RS10560: ABZR87_RS10560 - hypothetical protein, at 2,233,906 to 2,234,148 _RS10560 ABZR87_RS10565: ABZR87_RS10565 - cupin domain-containing protein, at 2,234,388 to 2,235,617 _RS10565
Group Condition ABZR87_RS10545 ABZR87_RS10550 ABZR87_RS10555 ABZR87_RS10560 ABZR87_RS10565
soil soil EcoFAB sample 2; outgrowth in LB N.D. -4.6 +0.1 N.D. -1.1
carbon source Valeric (C) N.D. -3.0 +0.2 N.D. -2.8
carbon source Sebacic (C) N.D. -2.2 -0.1 N.D. -3.1
carbon source Azelaic (C) N.D. -0.9 +0.0 N.D. -4.1
carbon source Heptanoic (C) N.D. -0.4 -0.1 N.D. -4.3
carbon source Sebacic (C) N.D. -0.2 -0.1 N.D. -4.3
soil soil sample 8; outgrowth in LB N.D. -3.2 +0.1 N.D. -1.5
carbon source Octanoic (C) N.D. -0.6 -0.8 N.D. -3.1
carbon source Hexanoic (C) N.D. -0.8 -0.2 N.D. -3.5
carbon source propionate (C) N.D. -0.1 -0.2 N.D. -4.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -3.1 +0.0 N.D. -1.0
carbon source acetate (C) N.D. -1.6 +0.1 N.D. -2.5
carbon source Heptanoic (C) N.D. +0.6 -0.6 N.D. -3.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. -3.7 +0.3 N.D. -0.5
carbon source Octanoic (C) N.D. +0.1 -0.7 N.D. -3.3
carbon source Valeric (C) N.D. -0.9 -0.0 N.D. -2.9
carbon source propionate (C) N.D. +0.2 -0.1 N.D. -3.8
carbon source butyrate (C) N.D. -0.4 -0.1 N.D. -3.2
soil soil sample 6; outgrowth in LB N.D. -1.6 -0.0 N.D. -1.9
carbon source adipate (C) N.D. -0.6 -0.1 N.D. -2.8
carbon source Suberic (C) N.D. -0.6 +0.2 N.D. -2.8
carbon source Lauric (C) N.D. +1.1 -0.3 N.D. -4.1
carbon source Dodecandioic (C) N.D. +1.0 -0.0 N.D. -3.5
carbon source Dodecandioic (C) N.D. +1.5 -0.1 N.D. -3.6
carbon source Protocatechuic Acid (C) N.D. +0.7 -0.2 N.D. -2.7
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. -3.0 +0.2 N.D. +0.9
rhizosphere rhizosphere sample 3; outgrowth in LB N.D. -2.3 -0.3 N.D. +0.9
rhizosphere rhizosphere sample 9; outgrowth in LB N.D. -2.3 +0.1 N.D. +1.3
micoeukaryotes C.elegans, mixed culture-1 N.D. +1.5 +0.0 N.D. -1.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +2.9 +0.7 N.D. -0.9
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ABZR87_RS10545
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ABZR87_RS10550
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