Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS10475 and ABZR87_RS10480 are separated by 57 nucleotidesABZR87_RS10480 and ABZR87_RS10485 are separated by 105 nucleotidesABZR87_RS10485 and ABZR87_RS10490 overlap by 4 nucleotidesABZR87_RS10490 and ABZR87_RS10495 are separated by 115 nucleotides ABZR87_RS10475: ABZR87_RS10475 - cell division protein FtsB, at 2,220,053 to 2,220,388 _RS10475 ABZR87_RS10480: ABZR87_RS10480 - hypothetical protein, at 2,220,446 to 2,220,859 _RS10480 ABZR87_RS10485: ABZR87_RS10485 - Hsp33 family molecular chaperone HslO, at 2,220,965 to 2,221,978 _RS10485 ABZR87_RS10490: ABZR87_RS10490 - gamma carbonic anhydrase family protein, at 2,221,975 to 2,222,502 _RS10490 ABZR87_RS10495: ABZR87_RS10495 - ferritin-like domain-containing protein, at 2,222,618 to 2,223,460 _RS10495
Group Condition ABZR87_RS10475 ABZR87_RS10480 ABZR87_RS10485 ABZR87_RS10490 ABZR87_RS10495
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.1 -0.3 -0.5 -0.3
rhizosphere rhizosphere sample 9; outgrowth in LB N.D. -0.2 -0.5 -0.2 -0.2
rhizosphere rhizosphere sample 3; outgrowth in LB N.D. +0.1 -0.7 -0.6 +0.3
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. -1.0 +0.1 +0.0 +0.0
soil soil sample 2; outgrowth in LB N.D. -0.2 +0.1 -0.3 -0.3
soil soil EcoFAB sample 2; outgrowth in LB N.D. -0.1 +0.1 -0.6 -0.1
root root sample 6; outgrowth in LB N.D. -0.5 -0.0 +0.1 -0.2
carbon source acetate (C) N.D. -0.2 -0.4 -0.3 +0.3
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.6 -0.2 -0.2 -0.1
no_plant_rhizosphere no_plant_rhizosphere sample 2; outgrowth in LB N.D. +0.1 +0.4 -0.3 -0.1
carbon source succinate (C) N.D. -0.2 -0.2 +0.1 +0.4
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.5 +0.2 -0.5 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.1 -0.4 -0.0 +0.5
rhizosphere rhizosphere sample 1; outgrowth in LB N.D. +0.1 -0.4 +0.4 -0.0
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB N.D. -0.0 +0.6 -0.3 -0.1
nitrogen source nitrogen source nitrite 0.5mM N.D. +0.1 -0.4 +0.0 +0.4
carbon source Valeric (C) N.D. -0.2 -0.1 +0.2 +0.4
carbon source Azelaic (C) N.D. -0.0 -0.4 +0.4 +0.5
carbon source Octanoic (C) N.D. -0.3 +0.2 +0.2 +0.5
carbon source Protocatechuic Acid (C) N.D. -0.2 -0.2 +0.7 +0.3
rhizosphere rhizosphere sample 5; outgrowth in LB N.D. +0.1 -0.2 +0.5 +0.1
carbon source Heptanoic (C) N.D. -0.2 +0.0 +0.3 +0.5
carbon source Protocatechuic Acid (C) N.D. -0.1 +0.2 +0.2 +0.4
nitrogen source nitrogen source nitrate 5mM N.D. +0.4 +0.4 -0.1 +0.0
carbon source propionate (C) N.D. +0.1 -0.2 +0.5 +0.4
carbon source Octanoic (C) N.D. +0.1 +0.5 -0.1 +0.3
root root sample 5; outgrowth in LB N.D. +0.3 +0.4 +0.2 -0.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.3 +0.6 -0.2 +0.3
carbon source Pimelic (C) N.D. +0.0 +0.1 +0.7 +0.2
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.3 +0.5 +0.6 +0.6
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ABZR87_RS10480
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