Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS10400 and ABZR87_RS10405 are separated by 71 nucleotidesABZR87_RS10405 and ABZR87_RS10410 overlap by 8 nucleotidesABZR87_RS10410 and ABZR87_RS10415 are separated by 20 nucleotidesABZR87_RS10415 and ABZR87_RS10420 are separated by 98 nucleotides ABZR87_RS10400: ABZR87_RS10400 - hypothetical protein, at 2,203,352 to 2,204,443 _RS10400 ABZR87_RS10405: ABZR87_RS10405 - lipoprotein-releasing ABC transporter permease subunit, at 2,204,515 to 2,205,765 _RS10405 ABZR87_RS10410: ABZR87_RS10410 - lipoprotein-releasing ABC transporter ATP-binding protein LolD, at 2,205,758 to 2,206,486 _RS10410 ABZR87_RS10415: ABZR87_RS10415 - DUF2845 domain-containing protein, at 2,206,507 to 2,206,812 _RS10415 ABZR87_RS10420: ABZR87_RS10420 - TatD family hydrolase, at 2,206,911 to 2,207,723 _RS10420
Group Condition ABZR87_RS10400 ABZR87_RS10405 ABZR87_RS10410 ABZR87_RS10415 ABZR87_RS10420
carbon source Octanoic (C) -3.5 N.D. N.D. -0.1 -1.1
carbon source propionate (C) -3.3 N.D. N.D. +0.0 -0.4
carbon source Sebacic (C) -2.3 N.D. N.D. -0.2 -0.9
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB -2.1 N.D. N.D. +0.3 -1.7
carbon source Octanoic (C) -3.2 N.D. N.D. -0.6 +0.4
carbon source Heptanoic (C) -3.0 N.D. N.D. +0.1 -0.4
soil soil EcoFAB sample 2; outgrowth in LB -2.1 N.D. N.D. -0.0 -1.1
carbon source Valeric (C) -2.4 N.D. N.D. -0.1 -0.7
soil soil EcoFAB sample 1; outgrowth in LB -1.8 N.D. N.D. -0.3 -0.8
carbon source Hexanoic (C) -2.4 N.D. N.D. +0.2 -0.5
carbon source Heptanoic (C) -2.7 N.D. N.D. -0.0 -0.1
root root EcoFAB sample 1; outgrowth in LB -1.8 N.D. N.D. -0.3 -0.6
soil soil sample 5; outgrowth in LB -2.4 N.D. N.D. -0.4 +0.0
carbon source D-Glucose (C) -2.7 N.D. N.D. +0.1 -0.1
carbon source Trans-2-methyl-2-butenoic (C) -2.8 N.D. N.D. +0.1 +0.1
carbon source Trans-2-methyl-2-butenoic (C) -2.7 N.D. N.D. +0.1 +0.0
carbon source propionate (C) -2.1 N.D. N.D. -0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.7 N.D. N.D. -0.5 -0.1
carbon source Lauric (C) -2.2 N.D. N.D. -0.0 +0.1
carbon source Hexanoic (C) -2.1 N.D. N.D. +0.0 -0.1
carbon source D-Galactose (C) -2.1 N.D. N.D. +0.1 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -1.4 N.D. N.D. -0.1 -0.6
soil soil sample 3; outgrowth in LB -2.2 N.D. N.D. -0.1 +0.3
carbon source propionate (C) -2.0 N.D. N.D. -0.1 +0.1
soil soil sample 1; outgrowth in LB -1.9 N.D. N.D. -0.0 +0.2
carbon source 3-Hydroxypropionate (C) -1.8 N.D. N.D. +0.2 +0.0
carbon source Lauric (C) -1.9 N.D. N.D. +0.2 +0.2
rhizosphere rhizosphere sample 9; outgrowth in LB +0.7 N.D. N.D. -0.2 -1.3
phage Ra1_0.1 +2.1 N.D. N.D. -0.1 -0.1
phage Ra3_1 +2.3 N.D. N.D. -0.1 -0.3
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