Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS10360	ABZR87_RS10365	ABZR87_RS10370	ABZR87_RS10375	ABZR87_RS10380
carbon source	adipate (C)	N.D.	-0.3	-0.2	-0.1	N.D.
carbon source	Azelaic (C)	N.D.	-0.1	-0.1	-0.2	N.D.
root	root EcoFAB sample 1; outgrowth in LB	N.D.	-0.1	-0.1	-0.2	N.D.
soil	soil EcoFAB sample 1; outgrowth in LB	N.D.	-0.6	+0.0	+0.2	N.D.
carbon source	Octanoic (C)	N.D.	-0.1	+0.1	-0.2	N.D.
carbon source	Protocatechuic Acid (C)	N.D.	-0.1	-0.2	+0.2	N.D.
control	NoPredeControl	N.D.	+0.1	-0.3	+0.1	N.D.
soil	soil sample 4; outgrowth in LB	N.D.	+0.2	-0.2	-0.1	N.D.
rhizosphere	rhizosphere sample 8; outgrowth in LB	N.D.	-0.2	+0.1	+0.1	N.D.
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	N.D.	-0.2	-0.1	+0.3	N.D.
carbon source	Sebacic (C)	N.D.	+0.5	-0.3	-0.2	N.D.
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-0.4	+0.4	+0.1	N.D.
micoeukaryotes	C.elegans, mixed culture-2	N.D.	+0.2	-0.2	+0.1	N.D.
carbon source	propionate (C)	N.D.	-0.3	+0.2	+0.1	N.D.
rhizosphere	rhizosphere sample 7; outgrowth in LB	N.D.	+0.0	+0.2	-0.2	N.D.
root	root EcoFAB sample 2; outgrowth in LB	N.D.	+0.1	+0.2	-0.2	N.D.
micoeukaryotes	Acanthamoeba sp., muxed culture-1	N.D.	+0.2	-0.2	+0.0	N.D.
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	N.D.	+0.3	-0.2	+0.1	N.D.
root	root sample 6; outgrowth in LB	N.D.	-0.6	+0.6	+0.2	N.D.
carbon source	Heptanoic (C)	N.D.	-0.1	+0.1	+0.2	N.D.
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.3	-0.1	+0.1	N.D.
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.7	-0.4	-0.0	N.D.
phage	Ra1_0.1	N.D.	+0.3	+0.1	-0.1	N.D.
phage	Ra1_0.01	N.D.	+0.0	+0.2	+0.2	N.D.
carbon source	4-Hydroxybenzoic Acid (C)	N.D.	+0.2	+0.2	+0.1	N.D.
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	N.D.	+0.1	+0.3	+0.1	N.D.
root	root sample 4; outgrowth in LB	N.D.	+0.2	+0.2	+0.1	N.D.
nitrogen source	nitrogen source nitrite 0.5mM	N.D.	+0.2	+0.1	+0.2	N.D.
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.2	+0.3	+0.1	N.D.
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.8	-0.0	+0.1	N.D.