Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS10255	ABZR87_RS10260	ABZR87_RS10265	ABZR87_RS10270	ABZR87_RS10275
carbon source	butyrate (C)	N.D.	N.D.	N.D.	-0.0	-3.8
root	root sample 6; outgrowth in LB	N.D.	N.D.	N.D.	+0.1	-2.5
phage	Ra1_0.1	N.D.	N.D.	N.D.	-0.1	-1.5
carbon source	D-Glucose (C)	N.D.	N.D.	N.D.	+0.0	-1.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	N.D.	N.D.	+0.1	-1.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	N.D.	N.D.	+0.2	-1.3
carbon source	Lauric (C)	N.D.	N.D.	N.D.	+0.1	-1.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	N.D.	N.D.	+0.3	-1.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	N.D.	N.D.	N.D.	-0.0	-0.7
carbon source	succinate (C)	N.D.	N.D.	N.D.	+0.1	-0.7
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	N.D.	N.D.	+0.3	-0.8
carbon source	Sebacic (C)	N.D.	N.D.	N.D.	+0.1	-0.6
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	N.D.	N.D.	N.D.	-0.1	+0.6
rhizosphere	rhizosphere EcoFAB sample 2; outgrowth in LB	N.D.	N.D.	N.D.	-0.1	+0.7
carbon source	D-Xylose (C)	N.D.	N.D.	N.D.	-0.1	+0.7
soil	soil sample 9; outgrowth in LB	N.D.	N.D.	N.D.	-0.0	+0.7
carbon source	Heptanoic (C)	N.D.	N.D.	N.D.	+0.2	+0.5
soil	soil sample 1; outgrowth in LB	N.D.	N.D.	N.D.	-0.1	+0.9
carbon source	Octanoic (C)	N.D.	N.D.	N.D.	+0.1	+0.7
nitrogen source	nitrogen source nitrite 1mM	N.D.	N.D.	N.D.	+0.0	+0.8
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	N.D.	N.D.	N.D.	+0.1	+0.8
root	root EcoFAB sample 1; outgrowth in LB	N.D.	N.D.	N.D.	+0.1	+0.8
no_plant_soil	no_plant_soil sample 2; outgrowth in LB	N.D.	N.D.	N.D.	+0.0	+0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	N.D.	N.D.	+0.3	+0.6
nitrogen source	nitrogen source nitrite 5mM	N.D.	N.D.	N.D.	-0.0	+1.0
nitrogen source	nitrogen source nitrate 5mM	N.D.	N.D.	N.D.	+0.2	+0.9
micoeukaryotes	Dictyostellum sp.mixed culture-2	N.D.	N.D.	N.D.	+0.1	+1.0
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	N.D.	N.D.	+0.2	+1.0
rhizosphere	rhizosphere sample 3; outgrowth in LB	N.D.	N.D.	N.D.	+0.1	+1.4
soil	soil EcoFAB sample 1; outgrowth in LB	N.D.	N.D.	N.D.	+0.2	+1.3