Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 129 experiments or choose conditions or try the comparative fitness browser

500 ntABZR87_RS10225 and ABZR87_RS10230 overlap by 4 nucleotidesABZR87_RS10230 and ABZR87_RS10235 are separated by 74 nucleotidesABZR87_RS10235 and ABZR87_RS10240 are separated by 122 nucleotidesABZR87_RS10240 and ABZR87_RS10245 are separated by 92 nucleotides ABZR87_RS10225: ABZR87_RS10225 - holo-ACP synthase, at 2,168,459 to 2,168,902 _RS10225 ABZR87_RS10230: ABZR87_RS10230 - beta-N-acetylhexosaminidase, at 2,168,899 to 2,169,948 _RS10230 ABZR87_RS10235: ABZR87_RS10235 - elongation factor P, at 2,170,023 to 2,170,592 _RS10235 ABZR87_RS10240: ABZR87_RS10240 - elongation factor P maturation arginine rhamnosyltransferase EarP, at 2,170,715 to 2,171,908 _RS10240 ABZR87_RS10245: ABZR87_RS10245 - excinuclease ABC subunit UvrC, at 2,172,001 to 2,173,974 _RS10245
Group Condition ABZR87_RS10225 ABZR87_RS10230 ABZR87_RS10235 ABZR87_RS10240 ABZR87_RS10245
carbon source D-Glucose (C) N.D. +0.0 N.D. -3.9 +0.0
carbon source propionate (C) N.D. +0.1 N.D. -4.0 +0.1
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB N.D. -1.5 N.D. -0.8 -1.4
phage Ra1_0.01 N.D. -0.5 N.D. -3.2 -0.0
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.3 N.D. -3.3 -0.1
soil soil EcoFAB sample 1; outgrowth in LB N.D. -1.6 N.D. -0.5 -1.6
carbon source Lauric (C) N.D. -0.2 N.D. -3.5 +0.1
soil soil EcoFAB sample 2; outgrowth in LB N.D. -1.7 N.D. -0.8 -1.0
carbon source Heptanoic (C) N.D. -0.0 N.D. -3.5 -0.0
carbon source adipate (C) N.D. -0.1 N.D. -3.0 -0.4
rhizosphere rhizosphere EcoFAB sample 2; outgrowth in LB N.D. -1.4 N.D. -1.1 -1.0
carbon source D-Glucose (C) N.D. +0.3 N.D. -3.7 -0.0
carbon source Protocatechuic Acid (C) N.D. -0.0 N.D. -3.1 -0.3
carbon source butyrate (C) N.D. -0.3 N.D. -3.1 +0.0
carbon source propionate (C) N.D. +0.1 N.D. -3.5 +0.1
carbon source butyrate (C) N.D. +0.2 N.D. -3.3 -0.2
carbon source Heptanoic (C) N.D. -0.0 N.D. -3.2 -0.1
carbon source Azelaic (C) N.D. -0.2 N.D. -3.2 +0.2
carbon source Sebacic (C) N.D. -0.0 N.D. -3.2 -0.0
carbon source propionate (C) N.D. -0.0 N.D. -3.2 +0.1
carbon source 3-Hydroxypropionate (C) N.D. +0.4 N.D. -3.3 +0.0
carbon source Dodecandioic (C) N.D. +0.3 N.D. -3.0 -0.1
carbon source 1,2-Propanediol (C) N.D. +0.7 N.D. -3.4 +0.1
carbon source succinate (C) N.D. +0.4 N.D. -2.7 -0.1
carbon source Octanoic (C) N.D. +0.6 N.D. -2.5 -0.1
carbon source Octanoic (C) N.D. +1.4 N.D. -2.4 -0.1
carbon source acetate (C) N.D. +1.1 N.D. -1.8 -0.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.8 N.D. +1.9 -1.3
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. -0.2 N.D. +2.7 -1.1
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. +0.5 N.D. +3.3 -1.3
remove
ABZR87_RS10225
plot		 remove
ABZR87_RS10230
plot		 remove
ABZR87_RS10235		 remove
ABZR87_RS10240
plot		 remove
ABZR87_RS10245
plot