Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS10100 and ABZR87_RS10105 are separated by 36 nucleotidesABZR87_RS10105 and ABZR87_RS10110 are separated by 5 nucleotidesABZR87_RS10110 and ABZR87_RS10115 are separated by 3 nucleotidesABZR87_RS10115 and ABZR87_RS10120 are separated by 190 nucleotides ABZR87_RS10100: ABZR87_RS10100 - Rieske (2Fe-2S) protein, at 2,147,138 to 2,147,539 _RS10100 ABZR87_RS10105: ABZR87_RS10105 - S49 family peptidase, at 2,147,576 to 2,148,688 _RS10105 ABZR87_RS10110: ABZR87_RS10110 - SAM-dependent methyltransferase, at 2,148,694 to 2,149,425 _RS10110 ABZR87_RS10115: ABZR87_RS10115 - Maf-like protein, at 2,149,429 to 2,150,025 _RS10115 ABZR87_RS10120: ABZR87_RS10120 - YceD family protein, at 2,150,216 to 2,150,752 _RS10120
Group Condition ABZR87_RS10100 ABZR87_RS10105 ABZR87_RS10110 ABZR87_RS10115 ABZR87_RS10120
carbon source Lauric (C) +0.0 -1.0 +0.1 N.D. -5.6
carbon source Azelaic (C) +0.4 -0.1 +0.2 N.D. -5.3
carbon source Octanoic (C) +0.2 -0.6 +0.8 N.D. -4.5
carbon source Octanoic (C) +0.2 -0.2 +0.4 N.D. -4.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.1 +0.0 +0.1 N.D. -4.2
carbon source Heptanoic (C) -0.2 -0.2 +0.1 N.D. -3.5
carbon source Heptanoic (C) -0.1 -0.2 +0.4 N.D. -3.8
no_plant_soil no_plant_soil sample 3; outgrowth in LB -0.1 -0.0 -0.0 N.D. -2.9
carbon source Dodecandioic (C) -0.2 -0.4 +0.1 N.D. -2.6
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.3 +0.1 -0.5 N.D. -2.4
carbon source Sebacic (C) +0.2 -0.0 +0.4 N.D. -3.4
no_plant_soil no_plant_soil sample 1; outgrowth in LB -0.1 +0.3 -0.0 N.D. -3.0
carbon source Sebacic (C) +0.1 -0.3 +0.0 N.D. -2.7
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB -0.5 +0.2 +0.2 N.D. -2.6
soil soil EcoFAB sample 2; outgrowth in LB -0.3 +0.1 -0.0 N.D. -2.5
soil soil sample 5; outgrowth in LB +0.0 +0.1 +0.1 N.D. -2.8
carbon source propionate (C) +0.2 -0.3 +0.3 N.D. -2.7
carbon source butyrate (C) +0.2 -0.2 +0.4 N.D. -2.8
carbon source 1,2-Propanediol (C) +0.3 -0.1 +0.2 N.D. -2.8
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.1 +0.0 +0.1 N.D. -2.6
phage Ra3_0.01 +0.1 +0.0 +0.1 N.D. -2.5
carbon source Valeric (C) +0.3 -0.2 -0.0 N.D. -2.4
soil soil sample 6; outgrowth in LB +0.4 +0.1 +0.1 N.D. -2.8
carbon source D-Glucose (C) +0.2 -0.1 +0.1 N.D. -2.5
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.2 +0.1 +0.1 N.D. -2.6
soil soil sample 4; outgrowth in LB +0.2 +0.1 +0.1 N.D. -2.4
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.0 +0.3 N.D. -2.4
rhizosphere rhizosphere EcoFAB sample 1; outgrowth in LB +0.3 +0.0 +0.4 N.D. -2.5
soil soil EcoFAB sample 1; outgrowth in LB +0.3 -0.0 +0.3 N.D. -2.2
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB +0.6 -0.1 +0.2 N.D. +2.4
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ABZR87_RS10100
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