Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS10085	ABZR87_RS10090	ABZR87_RS10095	ABZR87_RS10100	ABZR87_RS10105
nitrogen source	nitrogen source nitrate 20mM	-5.0	-0.1	+0.2	+0.2	-0.1
soil	soil sample 5; outgrowth in LB	-3.9	-0.2	+0.2	+0.0	+0.1
rhizosphere	rhizosphere EcoFAB sample 1; outgrowth in LB	-3.8	-0.4	-0.0	+0.3	+0.0
root	root EcoFAB sample 1; outgrowth in LB	-3.5	-0.7	+0.1	+0.2	+0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.0	-0.4	+0.1	-0.3	-0.1
soil	soil EcoFAB sample 1; outgrowth in LB	-3.5	-0.7	+0.3	+0.3	-0.0
no_plant_rhizosphere	no_plant_rhizosphere sample 3; outgrowth in LB	-2.9	-0.9	-0.0	+0.2	+0.2
nitrogen source	nitrogen source nitrite 0.5mM	-3.2	-0.3	+0.2	+0.2	-0.1
carbon source	Valeric (C)	-3.5	+0.0	+0.2	+0.0	-0.1
nitrogen source	nitrogen source nitrate 5mM	-3.8	+0.0	+0.5	-0.1	+0.1
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.9	-0.2	+0.1	-0.2	+0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-3.0	-0.0	-0.0	+0.1	-0.1
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	-2.1	-0.6	+0.1	-0.2	-0.0
soil	soil sample 6; outgrowth in LB	-2.8	-0.5	+0.1	+0.4	+0.1
carbon source	Pimelic (C)	-3.1	+0.0	+0.3	-0.0	+0.0
carbon source	propionate (C)	-2.3	-0.2	-0.1	+0.2	-0.3
nitrogen source	nitrogen source nitrite 1mM	-2.6	+0.0	+0.1	-0.2	-0.0
soil	soil sample 9; outgrowth in LB	-2.7	-0.1	+0.0	+0.1	+0.1
carbon source	propionate (C)	-2.0	-0.2	-0.2	+0.2	-0.2
rhizosphere	rhizosphere sample 6; outgrowth in LB	-1.6	-0.7	+0.3	-0.2	+0.2
rhizosphere	rhizosphere sample 1; outgrowth in LB	-2.1	-0.3	+0.4	+0.1	+0.0
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.1	-0.0	-0.1	+0.6	-0.1
carbon source	Octanoic (C)	+1.1	-0.9	-1.2	+0.2	-0.6
root	root sample 6; outgrowth in LB	-1.3	-1.2	+0.2	+0.6	+0.4
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	-2.2	-0.1	+0.0	+0.9	+0.4
carbon source	Dodecandioic (C)	+2.9	-0.3	-0.2	-0.2	-0.4
phage	Ra1_0.1	+1.9	-0.5	-0.2	+0.4	+0.2
phage	Ra3_1	+2.2	-0.3	-0.5	+0.4	+0.2
carbon source	Dodecandioic (C)	+3.2	-0.3	-0.2	+0.1	-0.4
carbon source	Sebacic (C)	+3.1	-0.5	-0.1	+0.2	-0.0