Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	ABZR87_RS10050	ABZR87_RS10055	ABZR87_RS10060	ABZR87_RS10065	ABZR87_RS10070
nitrogen source	nitrogen source nitrate 20mM	N.D.	-0.0	+0.0	-0.5	-5.7
nitrogen source	nitrogen source nitrate 5mM	N.D.	+0.0	+0.1	-0.2	-5.8
nitrogen source	nitrogen source nitrate 20mM	N.D.	+0.0	+0.0	+0.1	-4.1
root	root EcoFAB sample 2; outgrowth in LB	N.D.	-0.3	-0.4	-0.6	-1.2
no_plant_rhizosphere	no_plant_rhizosphere sample 1; outgrowth in LB	N.D.	+0.1	-0.3	-0.6	-1.6
root	root sample 6; outgrowth in LB	N.D.	-0.2	-0.6	+0.6	-2.1
rhizosphere	rhizosphere sample 3; outgrowth in LB	N.D.	+0.1	-0.9	-0.6	-0.8
no plant control	Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-0.4	-0.1	-0.1	-1.4
rhizosphere	rhizosphere sample 6; outgrowth in LB	N.D.	+0.1	-0.7	-0.4	-0.9
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.2	-0.4	-0.0	-1.6
no_plant_rhizosphere	no_plant_rhizosphere sample 2; outgrowth in LB	N.D.	+0.2	+0.2	-0.1	-1.9
phage	Ra3_1	N.D.	+0.0	-0.9	+0.3	-0.6
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	-0.2	-0.8	+0.3	-0.5
carbon source	Azelaic (C)	N.D.	+0.2	+0.3	-1.0	-0.7
carbon source	Octanoic (C)	N.D.	+0.5	-0.2	-0.4	-0.7
carbon source	4-Hydroxybenzoic Acid (C)	N.D.	+0.0	+0.4	-0.2	-1.0
carbon source	Protocatechuic Acid (C)	N.D.	+0.4	-0.2	-1.0	+0.0
root	root sample 5; outgrowth in LB	N.D.	+0.5	-0.8	-0.0	-0.5
carbon source	Protocatechuic Acid (C)	N.D.	-0.1	-0.3	-0.7	+0.5
carbon source	Dodecandioic (C)	N.D.	+0.1	+0.2	-1.5	+0.6
carbon source	Sebacic (C)	N.D.	+0.4	-0.2	-1.0	+0.1
carbon source	Heptanoic (C)	N.D.	+0.5	-0.0	-1.0	+0.2
micoeukaryotes	Dictyostellum sp.mixed culture-1	N.D.	-0.3	-0.6	-0.1	+0.8
carbon source	Dodecandioic (C)	N.D.	+0.2	-0.2	-1.1	+1.0
rhizosphere	rhizosphere sample 1; outgrowth in LB	N.D.	+0.1	-0.4	-0.4	+0.8
in planta	Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB	N.D.	+0.2	-0.8	+0.5	+0.3
carbon source	Octanoic (C)	N.D.	+0.3	-0.2	-0.6	+0.9
carbon source	Suberic (C)	N.D.	+0.3	+0.2	-0.6	+0.7
soil	soil EcoFAB sample 2; outgrowth in LB	N.D.	+0.0	-0.5	+0.2	+1.1
nitrogen source	nitrogen source nitrite 0.5mM	N.D.	-0.1	-0.2	+0.4	+1.3