Fitness for 5 genes in Ralstonia sp. UNC404CL21Col

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500 ntABZR87_RS09995 and ABZR87_RS10000 are separated by 34 nucleotidesABZR87_RS10000 and ABZR87_RS10005 are separated by 69 nucleotidesABZR87_RS10005 and ABZR87_RS10010 are separated by 52 nucleotidesABZR87_RS10010 and ABZR87_RS10015 are separated by 31 nucleotides ABZR87_RS09995: ABZR87_RS09995 - DUF3565 domain-containing protein, at 2,123,839 to 2,124,039 _RS09995 ABZR87_RS10000: ABZR87_RS10000 - Fe-S protein assembly co-chaperone HscB, at 2,124,074 to 2,124,613 _RS10000 ABZR87_RS10005: ABZR87_RS10005 - Fe-S protein assembly chaperone HscA, at 2,124,683 to 2,126,548 _RS10005 ABZR87_RS10010: ABZR87_RS10010 - ISC system 2Fe-2S type ferredoxin, at 2,126,601 to 2,126,939 _RS10010 ABZR87_RS10015: ABZR87_RS10015 - Fe-S cluster assembly protein IscX, at 2,126,971 to 2,127,165 _RS10015
Group Condition ABZR87_RS09995 ABZR87_RS10000 ABZR87_RS10005 ABZR87_RS10010 ABZR87_RS10015
rhizosphere rhizosphere sample 3; outgrowth in LB N.D. N.D. N.D. N.D. -1.0
no_plant_rhizosphere no_plant_rhizosphere sample 3; outgrowth in LB N.D. N.D. N.D. N.D. -1.0
carbon source Octanoic (C) N.D. N.D. N.D. N.D. -1.0
no_plant_rhizosphere no_plant_rhizosphere sample 1; outgrowth in LB N.D. N.D. N.D. N.D. -0.9
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. -0.9
root root EcoFAB sample 2; outgrowth in LB N.D. N.D. N.D. N.D. -0.8
carbon source Heptanoic (C) N.D. N.D. N.D. N.D. -0.8
no_plant_soil no_plant_soil sample 1; outgrowth in LB N.D. N.D. N.D. N.D. -0.8
soil soil sample 3; outgrowth in LB N.D. N.D. N.D. N.D. -0.8
carbon source Octanoic (C) N.D. N.D. N.D. N.D. -0.7
carbon source Hexanoic (C) N.D. N.D. N.D. N.D. -0.7
rhizosphere rhizosphere sample 5; outgrowth in LB N.D. N.D. N.D. N.D. -0.7
phage Ra1_0.1 N.D. N.D. N.D. N.D. -0.7
carbon source Pimelic (C) N.D. N.D. N.D. N.D. -0.6
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. N.D. -0.5
soil soil sample 4; outgrowth in LB N.D. N.D. N.D. N.D. -0.5
rhizosphere rhizosphere sample 7; outgrowth in LB N.D. N.D. N.D. N.D. +0.5
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.5
carbon source acetate (C) N.D. N.D. N.D. N.D. +0.5
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. N.D. +0.5
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. N.D. +0.6
nitrogen source nitrogen source nitrite 0.5mM N.D. N.D. N.D. N.D. +0.6
micoeukaryotes C.elegans, mixed culture-2 N.D. N.D. N.D. N.D. +0.7
micoeukaryotes Acanthamoeba sp., muxed culture-2 N.D. N.D. N.D. N.D. +0.7
no plant control Plant=None; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.8
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +0.9
control NoPredeControl N.D. N.D. N.D. N.D. +0.9
carbon source Disodium Glutarate (C) N.D. N.D. N.D. N.D. +0.9
carbon source Lauric (C) N.D. N.D. N.D. N.D. +1.0
in planta Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB N.D. N.D. N.D. N.D. +1.7
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